RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TM4SF4P48230 202 aa23.36■■□□□ 1.33
PNKP-220ENST00000627232 RPL7AP62424 266 aaKnown RBP23.36■■□□□ 1.33
PNKP-220ENST00000627232 BEX3Q00994 111 aa23.36■■□□□ 1.33
PNKP-220ENST00000627232 MTMR3Q13615 1198 aa23.36■■□□□ 1.33
PNKP-220ENST00000627232 SNX17Q15036 470 aa23.36■■□□□ 1.33
PNKP-220ENST00000627232 CNGA2Q16280 664 aa23.36■■□□□ 1.33
PNKP-220ENST00000627232 DCUN1D2Q6PH85 259 aa23.36■■□□□ 1.33
PNKP-220ENST00000627232 TMEM130Q8N3G9 435 aa23.36■■□□□ 1.33
PNKP-220ENST00000627232 BEST2Q8NFU1 509 aa23.36■■□□□ 1.33
PNKP-220ENST00000627232 ZIM3Q96PE6 472 aa23.36■■□□□ 1.33
PNKP-220ENST00000627232 TWNKQ96RR1 684 aa23.36■■□□□ 1.33
PNKP-220ENST00000627232 EIF2AQ9BY44 585 aaKnown RBP23.36■■□□□ 1.33
PNKP-220ENST00000627232 CNTN3Q9P232 1028 aa23.36■■□□□ 1.33
PNKP-220ENST00000627232 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.36■■□□□ 1.333e-6■■■■□ 21.1
PNKP-220ENST00000627232 TREHO43280 583 aa23.35■■□□□ 1.33
PNKP-220ENST00000627232 DUSP11O75319 330 aaKnown RBP23.35■■□□□ 1.33
PNKP-220ENST00000627232 HMGCRP04035 888 aa23.35■■□□□ 1.33
PNKP-220ENST00000627232 CETN2P41208 172 aa23.35■■□□□ 1.33
PNKP-220ENST00000627232 CRYBB1P53674 252 aaPredicted RBP23.35■■□□□ 1.33
PNKP-220ENST00000627232 IRX5P78411 483 aaPredicted RBP23.35■■□□□ 1.33
PNKP-220ENST00000627232 PURAQ00577 322 aaKnown RBP23.35■■□□□ 1.33
PNKP-220ENST00000627232 DMTNQ08495 405 aa23.35■■□□□ 1.33
PNKP-220ENST00000627232 SGO2Q562F6 1265 aa23.35■■□□□ 1.33
PNKP-220ENST00000627232 ALKAL1Q6UXT8 129 aa23.35■■□□□ 1.33
PNKP-220ENST00000627232 LRRC52Q8N7C0 313 aa23.35■■□□□ 1.33
PNKP-220ENST00000627232 MCEEQ96PE7 176 aa23.35■■□□□ 1.33
PNKP-220ENST00000627232 FAM129AQ9BZQ8 928 aa23.35■■□□□ 1.33
PNKP-220ENST00000627232 HOMER3Q9NSC5 361 aa23.35■■□□□ 1.33
PNKP-220ENST00000627232 PARP2Q9UGN5 583 aa23.35■■□□□ 1.33
PNKP-220ENST00000627232 SIGLEC16A6NMB1 481 aa23.34■■□□□ 1.33
PNKP-220ENST00000627232 GJB6O95452 261 aa23.34■■□□□ 1.33
PNKP-220ENST00000627232 ZNF268Q14587 947 aaPredicted RBP23.34■■□□□ 1.33
PNKP-220ENST00000627232 STILQ15468 1287 aa23.34■■□□□ 1.33
PNKP-220ENST00000627232 PTPN20Q4JDL3 420 aa23.34■■□□□ 1.33
PNKP-220ENST00000627232 SPDYCQ5MJ68 293 aa23.34■■□□□ 1.33
PNKP-220ENST00000627232 LRIG3Q6UXM1 1119 aa23.34■■□□□ 1.33
PNKP-220ENST00000627232 CCDC105Q8IYK2 499 aa23.34■■□□□ 1.33
PNKP-220ENST00000627232 RCOR2Q8IZ40 523 aa23.34■■□□□ 1.33
PNKP-220ENST00000627232 PIK3R5Q8WYR1 880 aa23.34■■□□□ 1.33
PNKP-220ENST00000627232 HMGXB4Q9UGU5 601 aa23.34■■□□□ 1.33
PNKP-220ENST00000627232 USTQ9Y2C2 406 aa23.34■■□□□ 1.33
PNKP-220ENST00000627232 CA12O43570 354 aa23.33■■□□□ 1.33
PNKP-220ENST00000627232 MICAL2O94851 1124 aa23.33■■□□□ 1.33
PNKP-220ENST00000627232 GABRB2P47870 512 aa23.33■■□□□ 1.33
PNKP-220ENST00000627232 ZNF252P-AS1Q0IIN9 211 aa23.33■■□□□ 1.33
PNKP-220ENST00000627232 SYDE1Q6ZW31 735 aaPredicted RBP23.33■■□□□ 1.33
PNKP-220ENST00000627232 FNIP1Q8TF40 1166 aa23.33■■□□□ 1.33
PNKP-220ENST00000627232 RIN2Q8WYP3 895 aaPredicted RBP23.33■■□□□ 1.33
PNKP-220ENST00000627232 RBM41Q96IZ5 413 aaKnown RBP23.33■■□□□ 1.33
PNKP-220ENST00000627232 TRIM6Q9C030 488 aaPredicted RBP23.33■■□□□ 1.33
PNKP-220ENST00000627232 ZDHHC18Q9NUE0 388 aa23.33■■□□□ 1.33
PNKP-220ENST00000627232 CYTH4Q9UIA0 394 aa23.33■■□□□ 1.33
PNKP-220ENST00000627232 O00370 1275 aa23.33■■□□□ 1.32
PNKP-220ENST00000627232 NDST1P52848 882 aa23.33■■□□□ 1.32
PNKP-220ENST00000627232 KLF1Q13351 362 aaPredicted RBP23.33■■□□□ 1.32
PNKP-220ENST00000627232 CYP4A22Q5TCH4 519 aa23.33■■□□□ 1.32
PNKP-220ENST00000627232 C7orf31Q8N865 590 aa23.33■■□□□ 1.32
PNKP-220ENST00000627232 HEXIM2Q96MH2 286 aaKnown RBP23.33■■□□□ 1.32
PNKP-220ENST00000627232 ZMAT2Q96NC0 199 aaKnown RBP23.33■■□□□ 1.32
PNKP-220ENST00000627232 FMO2Q99518 471 aa23.33■■□□□ 1.32
PNKP-220ENST00000627232 NT5C1AQ9BXI3 368 aa23.33■■□□□ 1.32
PNKP-220ENST00000627232 UBQLN1Q9UMX0 589 aaKnown RBP23.33■■□□□ 1.32
PNKP-220ENST00000627232 SCN1AP35498 2009 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 RECQL4O94761 1208 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 ECEL1O95672 775 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 CTGFP29279 349 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 FCGRTP55899 365 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 GJA9P57773 515 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 COPS2P61201 443 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 ZNF200P98182 395 aaPredicted RBP23.32■■□□□ 1.32
PNKP-220ENST00000627232 OGDHQ02218 1023 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 XKR4Q5GH76 650 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 TAF2Q6P1X5 1199 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 TMC3Q7Z5M5 1100 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 CCDC50Q8IVM0 306 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 TRPV1Q8NER1 839 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 GRK7Q8WTQ7 553 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 PPP1R13LQ8WUF5 828 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 TMEM40Q8WWA1 233 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 OSBPL8Q9BZF1 889 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 TRIM31Q9BZY9 425 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 DCLK3Q9C098 648 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 FAM204AQ9H8W3 233 aa23.32■■□□□ 1.32
PNKP-220ENST00000627232 DDX56Q9NY93 547 aaKnown RBP23.32■■□□□ 1.32
PNKP-220ENST00000627232 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.32■■□□□ 1.32
PNKP-220ENST00000627232 FEZ2Q9UHY8 353 aaPredicted RBP23.32■■□□□ 1.32
PNKP-220ENST00000627232 PIN4Q9Y237 131 aaKnown RBP23.32■■□□□ 1.32
PNKP-220ENST00000627232 XPOTO43592 962 aaKnown RBP23.31■■□□□ 1.32
PNKP-220ENST00000627232 CD4P01730 458 aa23.31■■□□□ 1.32
PNKP-220ENST00000627232 KRT3P12035 628 aa23.31■■□□□ 1.32
PNKP-220ENST00000627232 CYBAP13498 195 aa23.31■■□□□ 1.32
PNKP-220ENST00000627232 ATF7P17544 494 aaPredicted RBP23.31■■□□□ 1.32
PNKP-220ENST00000627232 HSD17B3P37058 310 aa23.31■■□□□ 1.32
PNKP-220ENST00000627232 GPD2P43304 727 aa23.31■■□□□ 1.32
PNKP-220ENST00000627232 SSR1P43307 286 aaKnown RBP23.31■■□□□ 1.32
PNKP-220ENST00000627232 GYS2P54840 703 aa23.31■■□□□ 1.32
PNKP-220ENST00000627232 PSMC1P62191 440 aaKnown RBP23.31■■□□□ 1.32
PNKP-220ENST00000627232 ORC1Q13415 861 aa23.31■■□□□ 1.32
PNKP-220ENST00000627232 DAB2IPQ5VWQ8 1189 aa23.31■■□□□ 1.32
PNKP-220ENST00000627232 MFSD14CQ5VZR4 134 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms