RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 ZC3H10Q96K80 434 aaKnown RBP4.78□□□□□ -1.64
TCF4-250ENST00000625849 SLC45A2Q9UMX9 530 aa4.78□□□□□ -1.64
TCF4-250ENST00000625849 CD8B2A6NJW9 211 aa4.77□□□□□ -1.65
TCF4-250ENST00000625849 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
TCF4-250ENST00000625849 HTR6P50406 440 aa4.77□□□□□ -1.65
TCF4-250ENST00000625849 PCID2Q5JVF3 399 aa4.77□□□□□ -1.65
TCF4-250ENST00000625849 SLC30A10Q6XR72 485 aa4.77□□□□□ -1.65
TCF4-250ENST00000625849 WDR53Q7Z5U6 358 aaPredicted RBP4.77□□□□□ -1.65
TCF4-250ENST00000625849 RHOT1Q8IXI2 618 aa4.77□□□□□ -1.65
TCF4-250ENST00000625849 MFSD3Q96ES6 412 aa4.77□□□□□ -1.65
TCF4-250ENST00000625849 DNAJC2Q99543 621 aaKnown RBP4.77□□□□□ -1.65
TCF4-250ENST00000625849 KRTAP4-4Q9BYR3 166 aa4.77□□□□□ -1.65
TCF4-250ENST00000625849 IFT22Q9H7X7 185 aa4.77□□□□□ -1.65
TCF4-250ENST00000625849 DLL3Q9NYJ7 618 aa4.77□□□□□ -1.65
TCF4-250ENST00000625849 KLHL13Q9P2N7 655 aa4.77□□□□□ -1.65
TCF4-250ENST00000625849 LY6G6EA0A0G2JKS1 128 aa4.76□□□□□ -1.65
TCF4-250ENST00000625849 ZEB2O60315 1214 aa4.76□□□□□ -1.65
TCF4-250ENST00000625849 ID4P47928 161 aa4.76□□□□□ -1.65
TCF4-250ENST00000625849 HOXA4Q00056 320 aaPredicted RBP4.76□□□□□ -1.65
TCF4-250ENST00000625849 DHCR24Q15392 516 aa4.76□□□□□ -1.65
TCF4-250ENST00000625849 RBMS2Q15434 407 aaKnown RBP4.76□□□□□ -1.65
TCF4-250ENST00000625849 ZNF628Q5EBL2 1059 aa4.76□□□□□ -1.65
TCF4-250ENST00000625849 C9orf47Q6ZRZ4 202 aa4.76□□□□□ -1.65
TCF4-250ENST00000625849 FAM136AQ96C01 138 aa4.76□□□□□ -1.65
TCF4-250ENST00000625849 TMX3Q96JJ7 454 aa4.76□□□□□ -1.65
TCF4-250ENST00000625849 CTAGE1Q96RT6 745 aa4.76□□□□□ -1.65
TCF4-250ENST00000625849 FAM118BQ9BPY3 351 aa4.76□□□□□ -1.65
TCF4-250ENST00000625849 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.76□□□□□ -1.65
TCF4-250ENST00000625849 E9PLN8 166 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 POLRMTO00411 1230 aaKnown RBP4.75□□□□□ -1.65
TCF4-250ENST00000625849 ANXA1P04083 346 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 ATP5F1P24539 256 aaPredicted RBP4.75□□□□□ -1.65
TCF4-250ENST00000625849 CYP2C18P33260 490 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 SCAND1P57086 179 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 CYP4F2P78329 520 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 RBM20Q5T481 1227 aaKnown RBP4.75□□□□□ -1.65
TCF4-250ENST00000625849 NAPRTQ6XQN6 538 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 RSPH3Q86UC2 560 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 DPF2Q92785 391 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 VKORC1Q9BQB6 163 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 HIPK2Q9H2X6 1198 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 DNAJC28Q9NX36 388 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 MDFICQ9P1T7 246 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 APOBEC2Q9Y235 224 aaKnown RBP4.75□□□□□ -1.65
TCF4-250ENST00000625849 PLAAQ9Y263 795 aa4.75□□□□□ -1.65
TCF4-250ENST00000625849 SOAT2O75908 522 aa4.74□□□□□ -1.65
TCF4-250ENST00000625849 OSMP13725 252 aa4.74□□□□□ -1.65
TCF4-250ENST00000625849 PRF1P14222 555 aa4.74□□□□□ -1.65
TCF4-250ENST00000625849 IL1R2P27930 398 aa4.74□□□□□ -1.65
TCF4-250ENST00000625849 TARDBPQ13148 414 aaKnown RBP eCLIP4.74□□□□□ -1.65
TCF4-250ENST00000625849 TRIM71Q2Q1W2 868 aaKnown RBP4.74□□□□□ -1.65
TCF4-250ENST00000625849 DALRD3Q5D0E6 543 aaKnown RBP4.74□□□□□ -1.65
TCF4-250ENST00000625849 TRIM72Q6ZMU5 477 aa4.74□□□□□ -1.65
TCF4-250ENST00000625849 CYP2W1Q8TAV3 490 aa4.74□□□□□ -1.65
TCF4-250ENST00000625849 APPBP2Q92624 585 aa4.74□□□□□ -1.65
TCF4-250ENST00000625849 RITA1Q96K30 269 aa4.74□□□□□ -1.65
TCF4-250ENST00000625849 TTC1Q99614 292 aa4.74□□□□□ -1.65
TCF4-250ENST00000625849 ABLIM3O94929 683 aa4.73□□□□□ -1.65
TCF4-250ENST00000625849 ITGALP20701 1170 aa4.73□□□□□ -1.65
TCF4-250ENST00000625849 LPOP22079 712 aaPredicted RBP4.73□□□□□ -1.65
TCF4-250ENST00000625849 CD6P30203 668 aa4.73□□□□□ -1.65
TCF4-250ENST00000625849 GTF2H3Q13889 308 aa4.73□□□□□ -1.65
TCF4-250ENST00000625849 SF3A1Q15459 793 aaKnown RBP4.73□□□□□ -1.65
TCF4-250ENST00000625849 CERKLQ49MI3 558 aaPredicted RBP4.73□□□□□ -1.65
TCF4-250ENST00000625849 FAM109AQ8N4B1 249 aa4.73□□□□□ -1.65
TCF4-250ENST00000625849 RAB24Q969Q5 203 aa4.73□□□□□ -1.65
TCF4-250ENST00000625849 MACROD1Q9BQ69 325 aa4.73□□□□□ -1.65
TCF4-250ENST00000625849 FOXP1Q9H334 677 aaPredicted RBP4.73□□□□□ -1.65
TCF4-250ENST00000625849 SMOC2Q9H3U7 446 aa4.73□□□□□ -1.65
TCF4-250ENST00000625849 SERHLQ9NQF3 203 aa4.73□□□□□ -1.65
TCF4-250ENST00000625849 TXLNGQ9NUQ3 528 aa4.73□□□□□ -1.65
TCF4-250ENST00000625849 TDP1Q9NUW8 608 aa4.73□□□□□ -1.65
TCF4-250ENST00000625849 SMAD6O43541 496 aaKnown RBP4.72□□□□□ -1.65
TCF4-250ENST00000625849 ENGP17813 658 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 KCNJ5P48544 419 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 MTNR1BP49286 362 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 LEXMQ3ZCV2 418 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 C18orf65Q6ZTR6 163 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 PSD4Q8NDX1 1056 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 IFI44Q8TCB0 444 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 CUL5Q93034 780 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 THOC3Q96J01 351 aaKnown RBP4.72□□□□□ -1.65
TCF4-250ENST00000625849 TRMOQ9BU70 441 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 ZSWIM4Q9H7M6 989 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 DUSP22Q9NRW4 184 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 ETAA1Q9NY74 926 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 SCAF8Q9UPN6 1271 aaKnown RBP4.72□□□□□ -1.65
TCF4-250ENST00000625849 ICKQ9UPZ9 632 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 FNDC1Q4ZHG4 1894 aaPredicted RBP4.72□□□□□ -1.65
TCF4-250ENST00000625849 DCAF1Q9Y4B6 1507 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 CLSPNQ9HAW4 1339 aa4.72□□□□□ -1.65
TCF4-250ENST00000625849 H7C1Q1 480 aa4.71□□□□□ -1.66
TCF4-250ENST00000625849 GTPBP1O00178 669 aaKnown RBP4.71□□□□□ -1.66
TCF4-250ENST00000625849 FCHO1O14526 889 aa4.71□□□□□ -1.66
TCF4-250ENST00000625849 USP1O94782 785 aa4.71□□□□□ -1.66
TCF4-250ENST00000625849 PDHA1P08559 390 aa4.71□□□□□ -1.66
TCF4-250ENST00000625849 CDC42EP1Q00587 391 aa4.71□□□□□ -1.66
TCF4-250ENST00000625849 NPY5RQ15761 445 aa4.71□□□□□ -1.66
TCF4-250ENST00000625849 TAF2Q6P1X5 1199 aa4.71□□□□□ -1.66
TCF4-250ENST00000625849 NRG4Q8WWG1 115 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms