RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 UBR7Q8N806 425 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 AGAP11Q8TF27 550 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 STAMBPL1Q96FJ0 436 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 TTC25Q96NG3 672 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 MTMR12Q9C0I1 747 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 LOC102724159A0A0B4J2E5 919 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 SGK1O00141 431 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 ASS1P00966 412 aaKnown RBP11.88□□□□□ -0.51
VARS2-213ENST00000625423 VCPP55072 806 aaKnown RBP11.88□□□□□ -0.51
VARS2-213ENST00000625423 MYL6P60660 151 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 MCL1Q07820 350 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 CAPSQ13938 189 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 PWP2Q15269 919 aaKnown RBP11.88□□□□□ -0.51
VARS2-213ENST00000625423 OASLQ15646 514 aaKnown RBP11.88□□□□□ -0.51
VARS2-213ENST00000625423 GPAT2Q6NUI2 795 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 GRAMD1AQ96CP6 724 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 WRNIP1Q96S55 665 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 TEX13BQ9BXU2 312 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 ARHGEF3Q9NR81 526 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 PICK1Q9NRD5 415 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 SAE1Q9UBE0 346 aaPredicted RBP11.88□□□□□ -0.51
VARS2-213ENST00000625423 ADAMTS5Q9UNA0 930 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 STAM2O75886 525 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 PDIA2Q13087 525 aaKnown RBP11.87□□□□□ -0.51
VARS2-213ENST00000625423 NR1H3Q13133 447 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 MORF4L2Q15014 288 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 TFDP3Q5H9I0 405 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 RNASEH2BQ5TBB1 312 aaKnown RBP11.87□□□□□ -0.51
VARS2-213ENST00000625423 LRRC38Q5VT99 294 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 ASRGL1Q7L266 308 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 ANKMY2Q8IV38 441 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 DENND1AQ8TEH3 1009 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 TCHPQ9BT92 498 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 C10orf88Q9H8K7 445 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 AS3MTQ9HBK9 375 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 SLCO1B3Q9NPD5 702 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 CISHQ9NSE2 258 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 GRID1Q9ULK0 1009 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 DRG1Q9Y295 367 aaKnown RBP11.87□□□□□ -0.51
VARS2-213ENST00000625423 SOCS7O14512 581 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 ATG7O95352 703 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 WEE2P0C1S8 567 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 RPA3P35244 121 aaPredicted RBP11.87□□□□□ -0.51
VARS2-213ENST00000625423 CDKN2BP42772 138 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 ZNF280AP59817 542 aaPredicted RBP11.87□□□□□ -0.51
VARS2-213ENST00000625423 DYNLT1P63172 113 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 STXBP2Q15833 593 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 SCARA5Q6ZMJ2 495 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 TDRPQ86YL5 185 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 WDTC1Q8N5D0 677 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 TMEM35BQ8NCS4 154 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 N4BP2L2Q92802 583 aaPredicted RBP11.87□□□□□ -0.51
VARS2-213ENST00000625423 SMC6Q96SB8 1091 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 TACO1Q9BSH4 297 aaKnown RBP11.87□□□□□ -0.51
VARS2-213ENST00000625423 UBN1Q9NPG3 1134 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 PHTF1Q9UMS5 762 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 A0A1W2PPM1 405 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 ALOX15BO15296 676 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 RPSAP08865 295 aaKnown RBP11.87□□□□□ -0.51
VARS2-213ENST00000625423 ELF1P32519 619 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 ACVR2BQ13705 512 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 CCDC142Q17RM4 750 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 DALRD3Q5D0E6 543 aaKnown RBP11.87□□□□□ -0.51
VARS2-213ENST00000625423 RPAINQ86UA6 219 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 BRSK2Q8IWQ3 736 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 TFAP2BQ92481 460 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 KCNN1Q92952 543 aa11.87□□□□□ -0.51
VARS2-213ENST00000625423 PRPF4O43172 522 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■■□□□ 13.8
VARS2-213ENST00000625423 ADCY3O60266 1144 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 LSM8O95777 96 aaKnown RBP11.86□□□□□ -0.51
VARS2-213ENST00000625423 ALADP13716 330 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 MSH2P43246 934 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 GAD2Q05329 585 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 PIGHQ14442 188 aaPredicted RBP11.86□□□□□ -0.51
VARS2-213ENST00000625423 SPARCL1Q14515 664 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 SMTNL2Q2TAL5 461 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 PPP1R15BQ5SWA1 713 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 CENPUQ71F23 418 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 ERICH1Q86X53 443 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 NIFKQ9BYG3 293 aaKnown RBP11.86□□□□□ -0.51
VARS2-213ENST00000625423 TMEM134Q9H6X4 195 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 ZWILCHQ9H900 591 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 MAGEB2O15479 319 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 ITGAVP06756 1048 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 CA4P22748 312 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 SLC1A5Q15758 541 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 WDR49Q8IV35 697 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 TAB3Q8N5C8 712 aaPredicted RBP11.86□□□□□ -0.51
VARS2-213ENST00000625423 NKD2Q969F2 451 aaPredicted RBP11.86□□□□□ -0.51
VARS2-213ENST00000625423 PCYT2Q99447 389 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 MYLK2Q9H1R3 596 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 ETNK1Q9HBU6 452 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 PCDH9Q9HC56 1237 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 STARD13Q9Y3M8 1113 aa11.86□□□□□ -0.51
VARS2-213ENST00000625423 PEX10O60683 326 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 PIAS1O75925 651 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 UNC5CO95185 931 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 ANP32DO95626 131 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms