RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 TMEM40Q8WWA1 233 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 KIF12Q96FN5 646 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 HMGXB4Q9UGU5 601 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 RALGAPA2Q2PPJ7 1873 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 TCRBV7S2A1N4TA0A589 114 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 FAM187AA6NFU0 413 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 FSCN2O14926 492 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 PSTPIP1O43586 416 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 GJB6O95452 261 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 P4HA1P13674 534 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 EN2P19622 333 aaPredicted RBP20.85■□□□□ 0.93
TREX1-205ENST00000625293 CHRNA3P32297 505 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 PTGIRP43119 386 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 CACNB2Q08289 660 aaPredicted RBP20.85■□□□□ 0.93
TREX1-205ENST00000625293 SNX17Q15036 470 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 ALKAL1Q6UXT8 129 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 C12orf50Q8NA57 414 aaPredicted RBP20.85■□□□□ 0.93
TREX1-205ENST00000625293 FAM71BQ8TC56 605 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 ZMAT2Q96NC0 199 aaKnown RBP20.85■□□□□ 0.93
TREX1-205ENST00000625293 RNF208Q9H0X6 261 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 PCYOX1Q9UHG3 505 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 C17orf102A2RUQ5 167 aa20.84■□□□□ 0.93
TREX1-205ENST00000625293 MED7O43513 233 aa20.84■□□□□ 0.93
TREX1-205ENST00000625293 DUSP11O75319 330 aaKnown RBP20.84■□□□□ 0.93
TREX1-205ENST00000625293 HMGCRP04035 888 aa20.84■□□□□ 0.93
TREX1-205ENST00000625293 DR1Q01658 176 aa20.84■□□□□ 0.93
TREX1-205ENST00000625293 PTPN11Q06124 597 aaPredicted RBP20.84■□□□□ 0.93
TREX1-205ENST00000625293 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.84■□□□□ 0.93
TREX1-205ENST00000625293 TMEM176AQ96HP8 235 aa20.84■□□□□ 0.93
TREX1-205ENST00000625293 CYTH4Q9UIA0 394 aa20.84■□□□□ 0.93
TREX1-205ENST00000625293 MYADML2A6NDP7 307 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 POLR3GO15318 223 aaPredicted RBP20.83■□□□□ 0.93
TREX1-205ENST00000625293 RARAP10276 462 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 CYBAP13498 195 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 PRKAR2AP13861 404 aaKnown RBP20.83■□□□□ 0.93
TREX1-205ENST00000625293 CD19P15391 556 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 TAS2R40P59535 323 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 RPL7AP62424 266 aaKnown RBP20.83■□□□□ 0.93
TREX1-205ENST00000625293 ZNF252P-AS1Q0IIN9 211 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 TERF2Q15554 542 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 PTPN20Q4JDL3 420 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 TTC27Q6P3X3 843 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 ERICH1Q86X53 443 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 DDX42Q86XP3 938 aaKnown RBP eCLIP20.83■□□□□ 0.93
TREX1-205ENST00000625293 PLVAPQ9BX97 442 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 NEUROG2Q9H2A3 272 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 CNTN3Q9P232 1028 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 IP6K2Q9UHH9 426 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 LCMT1Q9UIC8 334 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 CEP83Q9Y592 693 aa20.83■□□□□ 0.93
TREX1-205ENST00000625293 O00370 1275 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 DAPK3O43293 454 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 CCND3P30281 292 aaPredicted RBP20.82■□□□□ 0.92
TREX1-205ENST00000625293 GSCP56915 257 aaPredicted RBP20.82■□□□□ 0.92
TREX1-205ENST00000625293 GJA9P57773 515 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 DUPD1Q68J44 220 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 DNAJC24Q6P3W2 148 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 NME8Q8N427 588 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 C3orf20Q8ND61 904 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 C18orf8Q96DM3 657 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 TRIM51Q9BSJ1 452 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 FAM114A2Q9NRY5 505 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 BARX2Q9UMQ3 279 aaPredicted RBP20.82■□□□□ 0.92
TREX1-205ENST00000625293 UTP11Q9Y3A2 253 aaKnown RBP20.82■□□□□ 0.92
TREX1-205ENST00000625293 GOLGA6BA6NDN3 693 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 GGCXP38435 758 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 HSPA9P38646 679 aaKnown RBP20.82■□□□□ 0.92
TREX1-205ENST00000625293 CRYBB1P53674 252 aaPredicted RBP20.82■□□□□ 0.92
TREX1-205ENST00000625293 TAP1Q03518 808 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 ORC1Q13415 861 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 UBXN11Q5T124 520 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 DAB2IPQ5VWQ8 1189 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 ALS2CLQ60I27 953 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 JAMLQ86YT9 394 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 RHOT1Q8IXI2 618 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 KATNAL2Q8IYT4 538 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 TTC39CQ8N584 583 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 MAGOHBQ96A72 148 aaKnown RBP20.82■□□□□ 0.92
TREX1-205ENST00000625293 ERP44Q9BS26 406 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 RAB17Q9H0T7 212 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 NXF3Q9H4D5 531 aaKnown RBP20.82■□□□□ 0.92
TREX1-205ENST00000625293 MTUS1Q9ULD2 1270 aa20.82■□□□□ 0.92
TREX1-205ENST00000625293 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.82■□□□□ 0.92
TREX1-205ENST00000625293 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.82■□□□□ 0.92
TREX1-205ENST00000625293 KPNA6O60684 536 aa20.81■□□□□ 0.92
TREX1-205ENST00000625293 OGDHQ02218 1023 aa20.81■□□□□ 0.92
TREX1-205ENST00000625293 HSP90B2PQ58FF3 399 aa20.81■□□□□ 0.92
TREX1-205ENST00000625293 HERPUD2Q9BSE4 406 aa20.81■□□□□ 0.92
TREX1-205ENST00000625293 TMEM106CQ9BVX2 250 aa20.81■□□□□ 0.92
TREX1-205ENST00000625293 LRRC19Q9H756 370 aa20.81■□□□□ 0.92
TREX1-205ENST00000625293 STRIP2Q9ULQ0 834 aa20.81■□□□□ 0.92
TREX1-205ENST00000625293 HES2Q9Y543 173 aa20.81■□□□□ 0.92
TREX1-205ENST00000625293 CITO14578 2027 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 RECQL4O94761 1208 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 MICAL2O94851 1124 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 VDRP11473 427 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 GNAT1P11488 350 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 COILP38432 576 aaPredicted RBP20.8■□□□□ 0.92
TREX1-205ENST00000625293 FNTAP49354 379 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 YARSP54577 528 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms