RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 GNEQ9Y223 722 aaKnown RBP22.53■■□□□ 1.2
LIME1-210ENST00000621325 A6NJR5 290 aa22.53■■□□□ 1.2
LIME1-210ENST00000621325 SMIM10L2AP0DMW4 78 aa22.53■■□□□ 1.2
LIME1-210ENST00000621325 SMIM10L2BP0DMW5 78 aa22.53■■□□□ 1.2
LIME1-210ENST00000621325 HOXA11P31270 313 aaPredicted RBP22.53■■□□□ 1.2
LIME1-210ENST00000621325 ZNF844Q08AG5 666 aa22.53■■□□□ 1.2
LIME1-210ENST00000621325 PPP1R15BQ5SWA1 713 aa22.53■■□□□ 1.2
LIME1-210ENST00000621325 RNF25Q96BH1 459 aaPredicted RBP22.53■■□□□ 1.2
LIME1-210ENST00000621325 PI4K2BG5E9Z4 385 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 PPFIA2O75334 1257 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 MAP2K5Q13163 448 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 DCUN1D2Q6PH85 259 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 ZNF410Q86VK4 478 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 KATNAL2Q8IYT4 538 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 CILPO75339 1184 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 NPTXRO95502 500 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 ECEL1O95672 775 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 MAN1A1P33908 653 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 KLF1Q13351 362 aaPredicted RBP22.52■■□□□ 1.2
LIME1-210ENST00000621325 TXNRD3NBQ6F5E7 133 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 RUFY4Q6ZNE9 571 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 ADPGKQ9BRR6 497 aa22.52■■□□□ 1.2
LIME1-210ENST00000621325 GOLGA8SH3BPF8 625 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 LRIG3Q6UXM1 1119 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 ACSF2Q96CM8 615 aaPredicted RBP22.51■■□□□ 1.19
LIME1-210ENST00000621325 OSMRQ99650 979 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 DCLK3Q9C098 648 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 RNF19AQ9NV58 838 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 DPP3Q9NY33 737 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 SUFUQ9UMX1 484 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 HES2Q9Y543 173 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 GPR32O75388 356 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 F2P00734 622 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 SATB1Q01826 763 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 ADCY2Q08462 1091 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 MTMR3Q13615 1198 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 PPP1R7Q15435 360 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 UBAP2Q5T6F2 1119 aaKnown RBP22.51■■□□□ 1.19
LIME1-210ENST00000621325 TLK2Q86UE8 772 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 KIF12Q96FN5 646 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 EIF2AQ9BY44 585 aaKnown RBP22.51■■□□□ 1.19
LIME1-210ENST00000621325 OSBPL8Q9BZF1 889 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 EPB41L4BQ9H329 900 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 CENPHQ9H3R5 247 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 SLC5A4Q9NY91 659 aa22.51■■□□□ 1.19
LIME1-210ENST00000621325 PASKQ96RG2 1323 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 PAEPP09466 180 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 ZNF865P0CJ78 1059 aaPredicted RBP22.5■■□□□ 1.19
LIME1-210ENST00000621325 KRT17Q04695 432 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 PTPN11Q06124 597 aaPredicted RBP22.5■■□□□ 1.19
LIME1-210ENST00000621325 TTC19Q6DKK2 380 aaPredicted RBP22.5■■□□□ 1.19
LIME1-210ENST00000621325 C3orf20Q8ND61 904 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 CPXM1Q96SM3 734 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 VRTNQ9H8Y1 702 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 TMBIM4Q9HC24 238 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 SNTG2Q9NY99 539 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 RRN3P2A6NIE6 340 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 ATICP31939 592 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 ACTN2P35609 894 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 TRIP13Q15645 432 aaPredicted RBP22.5■■□□□ 1.19
LIME1-210ENST00000621325 DPH6Q7L8W6 267 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 EXD1Q8NHP7 514 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 TMEM176AQ96HP8 235 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 ATP6V1G3Q96LB4 118 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 RUNDC3BQ96NL0 473 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 LHX5Q9H2C1 402 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 NMRK2Q9NPI5 230 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 C2CD2Q9Y426 696 aa22.5■■□□□ 1.19
LIME1-210ENST00000621325 KRT10P13645 584 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 RFC1P35251 1148 aaPredicted RBP22.49■■□□□ 1.19
LIME1-210ENST00000621325 GRM5P41594 1212 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 ZNF157P51786 506 aaPredicted RBP22.49■■□□□ 1.19
LIME1-210ENST00000621325 TAF1CQ15572 869 aaPredicted RBP22.49■■□□□ 1.19
LIME1-210ENST00000621325 KYAT1Q16773 422 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 CATSPER4Q7RTX7 472 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 RASAL3Q86YV0 1011 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 JOSD2Q8TAC2 188 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 ZMAT2Q96NC0 199 aaKnown RBP22.49■■□□□ 1.19
LIME1-210ENST00000621325 CITO14578 2027 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 TP73O15350 636 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 MED7O43513 233 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 CYP2B6P20813 491 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 ATP1A2P50993 1020 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 ZNF200P98182 395 aaPredicted RBP22.49■■□□□ 1.19
LIME1-210ENST00000621325 ZFYVE27Q5T4F4 411 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 SLCO2A1Q92959 643 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 ITGA11Q9UKX5 1188 aa22.49■■□□□ 1.19
LIME1-210ENST00000621325 TRIP11Q15643 1979 aa22.48■■□□□ 1.19
LIME1-210ENST00000621325 PPEF2O14830 753 aa22.48■■□□□ 1.19
LIME1-210ENST00000621325 MICAL2O94851 1124 aa22.48■■□□□ 1.19
LIME1-210ENST00000621325 ERBB2P04626 1255 aa22.48■■□□□ 1.19
LIME1-210ENST00000621325 CYP2C9P11712 490 aa22.48■■□□□ 1.19
LIME1-210ENST00000621325 RBP5P82980 135 aa22.48■■□□□ 1.19
LIME1-210ENST00000621325 BEX3Q00994 111 aa22.48■■□□□ 1.19
LIME1-210ENST00000621325 GCOM2Q9BZD3 368 aaPredicted RBP22.48■■□□□ 1.19
LIME1-210ENST00000621325 NRCAMQ92823 1304 aa22.48■■□□□ 1.19
LIME1-210ENST00000621325 MAGEA9P43362 315 aa22.48■■□□□ 1.19
LIME1-210ENST00000621325 PMS2P54278 862 aa22.48■■□□□ 1.19
LIME1-210ENST00000621325 NFX1Q12986 1120 aaKnown RBP22.48■■□□□ 1.19
LIME1-210ENST00000621325 MFSD10Q14728 455 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms