RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 RTL9Q8NET4 1388 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 MZF1P28698 734 aaPredicted RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 ARL4CP56559 192 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 USH1GQ495M9 461 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 KAZNQ674X7 775 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 TMIGD2Q96BF3 282 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 STK32BQ9NY57 414 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 TAS2R14Q9NYV8 317 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 ZNF219Q9P2Y4 722 aaPredicted RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 RBAK-RBAKDNI3L0D1 243 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 K7EPI3 171 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 C2CD2LO14523 706 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 SORBS2O94875 1100 aaKnown RBP12.85□□□□□ -0.35
MATR3-227ENST00000618441 CALML3P27482 149 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 MOGSQ13724 837 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 CTC1Q2NKJ3 1217 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 PERM1Q5SV97 790 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 C10orf76Q5T2E6 689 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 RFFLQ8WZ73 363 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 GFM2Q969S9 779 aaKnown RBP12.85□□□□□ -0.35
MATR3-227ENST00000618441 LRGUKQ96M69 825 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 PCDHGB4Q9UN71 923 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 CARD8Q9Y2G2 431 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 PCDHGB5Q9Y5G0 923 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 FUOMA2VDF0 154 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 A8MXQ7 604 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 TFAP2AP05549 437 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 XRCC5P13010 732 aaKnown RBP12.85□□□□□ -0.35
MATR3-227ENST00000618441 S100A1P23297 94 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 NAPAP54920 295 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 TRIM16LQ309B1 348 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 ANO4Q32M45 955 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 TRMT5Q32P41 509 aaKnown RBP12.85□□□□□ -0.35
MATR3-227ENST00000618441 PPP6R3Q5H9R7 873 aaPredicted RBP12.85□□□□□ -0.35
MATR3-227ENST00000618441 KRT80Q6KB66 452 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 PACS1Q6VY07 963 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 ARID3BQ8IVW6 561 aaPredicted RBP12.85□□□□□ -0.35
MATR3-227ENST00000618441 SAMD14Q8IZD0 417 aaPredicted RBP12.85□□□□□ -0.35
MATR3-227ENST00000618441 MANSC1Q9H8J5 431 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 DKK3Q9UBP4 350 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 CFLARO15519 480 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 ZBED1O96006 694 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 CHRNB2P17787 502 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 BGNP21810 368 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 COMTP21964 271 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 LRRC63Q05C16 580 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 CCDC153Q494R4 210 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 C6orf52Q5T4I8 152 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 RASGEF1CQ8N431 466 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 HES6Q96HZ4 224 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 CNGB3Q9NQW8 809 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 GRID1Q9ULK0 1009 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 DMTF1Q9Y222 760 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 NOP56O00567 594 aaKnown RBP12.85□□□□□ -0.35
MATR3-227ENST00000618441 EMP3P54852 163 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 NONOQ15233 471 aaKnown RBP eCLIP12.85□□□□□ -0.357e-8■■■■■ 28.9
MATR3-227ENST00000618441 COBLL1Q53SF7 1204 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 KRT79Q5XKE5 535 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 RELL1Q8IUW5 271 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 KCNN1Q92952 543 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 NSMCE3Q96MG7 304 aa12.85□□□□□ -0.35
MATR3-227ENST00000618441 NOTOA8MTQ0 251 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 HNRNPCL1O60812 293 aaKnown RBP12.84□□□□□ -0.35
MATR3-227ENST00000618441 ZMPSTE24O75844 475 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 HSPA8P11142 646 aaKnown RBP12.84□□□□□ -0.35
MATR3-227ENST00000618441 FOXO4P98177 505 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 PEX6Q13608 980 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 HEATR4Q86WZ0 1026 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 METTL25Q8N6Q8 603 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 PDZD8Q8NEN9 1154 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 FERMT1Q9BQL6 677 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 PCDH12Q9NPG4 1184 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 WTIPA6NIX2 430 aaPredicted RBP12.84□□□□□ -0.35
MATR3-227ENST00000618441 GSG1L2A8MUP6 293 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 CES2O00748 559 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 PTGIRP43119 386 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 PDAP1Q13442 181 aaKnown RBP12.84□□□□□ -0.35
MATR3-227ENST00000618441 LRP8Q14114 963 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 PDK4Q16654 411 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 DCAF6Q58WW2 860 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 CPNE9Q8IYJ1 553 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 GUF1Q8N442 669 aaKnown RBP12.84□□□□□ -0.35
MATR3-227ENST00000618441 ATP2A3Q93084 1043 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 EDEM3Q9BZQ6 932 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 RSL24D1Q9UHA3 163 aaKnown RBP12.84□□□□□ -0.35
MATR3-227ENST00000618441 FAM32AQ9Y421 112 aaKnown RBP12.84□□□□□ -0.35
MATR3-227ENST00000618441 UTYO14607 1347 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 SYNGAP1Q96PV0 1343 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 ITPK1Q13572 414 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 MAP3K21Q5TCX8 1036 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 IZUMO3Q5VZ72 239 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 DGKHQ86XP1 1220 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 PDSS2Q86YH6 399 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 TMPRSS6Q8IU80 811 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 RNF148Q8N7C7 305 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 PRICKLE1Q96MT3 831 aaPredicted RBP12.84□□□□□ -0.35
MATR3-227ENST00000618441 NUF2Q9BZD4 464 aa12.84□□□□□ -0.35
MATR3-227ENST00000618441 HOMER2Q9NSB8 354 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms