RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 DDX12PQ92771 950 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 MSANTD3Q96H12 275 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 INTS4Q96HW7 963 aaKnown RBP9.27□□□□□ -0.93
GPC6-202ENST00000617456 ZFYVE19Q96K21 471 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 PGLYRP2Q96PD5 576 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 OXCT2Q9BYC2 517 aaPredicted RBP9.27□□□□□ -0.93
GPC6-202ENST00000617456 CDT1Q9H211 546 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 SUDS3Q9H7L9 328 aaPredicted RBP9.27□□□□□ -0.93
GPC6-202ENST00000617456 PLEKHA5Q9HAU0 1116 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 TRPV4Q9HBA0 871 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 KMT5AQ9NQR1 393 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 YIPF1Q9Y548 306 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 IGF2RP11717 2491 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 FRYQ5TBA9 3013 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 COL4A2P08572 1712 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 E9PMD0 336 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 EXTL3O43909 919 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 HIP1RO75146 1068 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 PAPSS2O95340 614 aaPredicted RBP9.26□□□□□ -0.93
GPC6-202ENST00000617456 OR4Q2P0C623 313 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 CCDC192P0DO97 292 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 MARCKSP29966 332 aaPredicted RBP9.26□□□□□ -0.93
GPC6-202ENST00000617456 CTHP32929 405 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 UBA7P41226 1012 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 EPHB3P54753 998 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 EPHA5P54756 1037 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 SLC12A3P55017 1021 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 PEX3P56589 373 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 STRN3Q13033 797 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 MAPK7Q13164 816 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 FOXD4L6Q3SYB3 417 aaPredicted RBP9.26□□□□□ -0.93
GPC6-202ENST00000617456 STPG1Q5TH74 334 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 C1orf228Q6PIY5 440 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 MPZL3Q6UWV2 235 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 FOXD4L3Q6VB84 417 aaPredicted RBP9.26□□□□□ -0.93
GPC6-202ENST00000617456 CACNA2D4Q7Z3S7 1137 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 KBTBD6Q86V97 674 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 ARID3BQ8IVW6 561 aaPredicted RBP9.26□□□□□ -0.93
GPC6-202ENST00000617456 APPL2Q8NEU8 664 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 ERCC4Q92889 916 aaPredicted RBP9.26□□□□□ -0.93
GPC6-202ENST00000617456 E2F7Q96AV8 911 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 CALML4Q96GE6 196 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 CDK5RAP3Q96JB5 506 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 SUSD3Q96L08 255 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 ACAP3Q96P50 834 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 TCHPQ9BT92 498 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 GPR88Q9GZN0 384 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 GTSE1Q9NYZ3 720 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 CNTN3Q9P232 1028 aa9.26□□□□□ -0.93
GPC6-202ENST00000617456 TIMM13Q9Y5L4 95 aaPredicted RBP9.26□□□□□ -0.93
GPC6-202ENST00000617456 SPAG17Q6Q759 2223 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 FASNP49327 2511 aaKnown RBP9.25□□□□□ -0.93
GPC6-202ENST00000617456 MYBPHLA2RUH7 354 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 VWA3AA6NCI4 1184 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 HMGB1P1B2RPK0 211 aaPredicted RBP9.25□□□□□ -0.93
GPC6-202ENST00000617456 RPP40O75818 363 aaKnown RBP9.25□□□□□ -0.93
GPC6-202ENST00000617456 SOAT2O75908 522 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 EPN2O95208 641 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 ZNF806P0C7X5 589 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 PLA2G4BP0C869 781 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 CYP3A5P20815 502 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 PEX19P40855 299 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 ZNF131P52739 623 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 LIMK1P53667 647 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 MLLT6P55198 1093 aaPredicted RBP9.25□□□□□ -0.93
GPC6-202ENST00000617456 SHC2P98077 582 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 MCL1Q07820 350 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 TNK2Q07912 1038 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 DUSP4Q13115 394 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 COL9A2Q14055 689 aaPredicted RBP9.25□□□□□ -0.93
GPC6-202ENST00000617456 TMEM119Q4V9L6 283 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 GPR158Q5T848 1215 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 PSAPL1Q6NUJ1 521 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 PKN3Q6P5Z2 889 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 HAUS6Q7Z4H7 955 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 RALGPS2Q86X27 583 aaPredicted RBP9.25□□□□□ -0.93
GPC6-202ENST00000617456 TMC8Q8IU68 726 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 TMEM161BQ8NDZ6 487 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 CXorf38Q8TB03 319 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 CALR3Q96L12 384 aaKnown RBP9.25□□□□□ -0.93
GPC6-202ENST00000617456 LRRC3BQ96PB8 259 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 TARS2Q9BW92 718 aaKnown RBP9.25□□□□□ -0.93
GPC6-202ENST00000617456 NUCKS1Q9H1E3 243 aaKnown RBP9.25□□□□□ -0.93
GPC6-202ENST00000617456 DNAJC25Q9H1X3 360 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 ATXN3LQ9H3M9 355 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 ST6GALNAC4Q9H4F1 302 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 TUBGCP4Q9UGJ1 667 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 PCDHB8Q9UN66 801 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 SLC27A5Q9Y2P5 690 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 ATG2BQ96BY7 2078 aa9.25□□□□□ -0.93
GPC6-202ENST00000617456 C1QTNF9BB2RNN3 333 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 ABLIM1O14639 778 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 TM4SF5O14894 197 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 CLDN3O15551 220 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 MEFVO15553 781 aaPredicted RBP9.24□□□□□ -0.93
GPC6-202ENST00000617456 KCNK5O95279 499 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 VNN2O95498 520 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 PIGRP01833 764 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 PROS1P07225 676 aa9.24□□□□□ -0.93
GPC6-202ENST00000617456 ADRB2P07550 413 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms