RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 SLC4A11Q8NBS3 891 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 SCLT1Q96NL6 688 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 MCEEQ96PE7 176 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 EPB41L4BQ9H329 900 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 WDR35Q9P2L0 1181 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 USTQ9Y2C2 406 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 PTPN22Q9Y2R2 807 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 SIGLEC16A6NMB1 481 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 GAS8O95995 478 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 CD19P15391 556 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 ITIH2P19823 946 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 NR1D1P20393 614 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 PTPN7P35236 360 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 CDH8P55286 799 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 RBP5P82980 135 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 PTPN11Q06124 597 aaPredicted RBP16.64■□□□□ 0.25
NR1H3-235ENST00000616973 PCBP1Q15365 356 aaKnown RBP eCLIP16.64■□□□□ 0.25
NR1H3-235ENST00000616973 OR2W6PQ8NHA6 318 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 FNIP1Q8TF40 1166 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 TMEM176AQ96HP8 235 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 SMYD3Q9H7B4 428 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 PLEKHA5Q9HAU0 1116 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 DERAQ9Y315 318 aa16.64■□□□□ 0.25
NR1H3-235ENST00000616973 ADCY6O43306 1168 aa16.63■□□□□ 0.25
NR1H3-235ENST00000616973 OGDHQ02218 1023 aa16.63■□□□□ 0.25
NR1H3-235ENST00000616973 INCA1Q0VD86 236 aa16.63■□□□□ 0.25
NR1H3-235ENST00000616973 CALCOCO2Q13137 446 aa16.63■□□□□ 0.25
NR1H3-235ENST00000616973 PTPN20Q4JDL3 420 aa16.63■□□□□ 0.25
NR1H3-235ENST00000616973 ARFGAP2Q8N6H7 521 aa16.63■□□□□ 0.25
NR1H3-235ENST00000616973 HPDLQ96IR7 371 aa16.63■□□□□ 0.25
NR1H3-235ENST00000616973 ELOVL4Q9GZR5 314 aa16.63■□□□□ 0.25
NR1H3-235ENST00000616973 ADAMTS10Q9H324 1103 aa16.63■□□□□ 0.25
NR1H3-235ENST00000616973 DPP3Q9NY33 737 aa16.63■□□□□ 0.25
NR1H3-235ENST00000616973 DDX56Q9NY93 547 aaKnown RBP16.63■□□□□ 0.25
NR1H3-235ENST00000616973 AGAP1Q9UPQ3 857 aa16.63■□□□□ 0.25
NR1H3-235ENST00000616973 GNEQ9Y223 722 aaKnown RBP16.63■□□□□ 0.25
NR1H3-235ENST00000616973 NEU2Q9Y3R4 380 aa16.63■□□□□ 0.25
NR1H3-235ENST00000616973 F2P00734 622 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 VDRP11473 427 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 RARGP13631 454 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 NFX1Q12986 1120 aaKnown RBP16.62■□□□□ 0.25
NR1H3-235ENST00000616973 SNX1Q13596 522 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 CROCCP2Q86T23 111 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 ATG4AQ8WYN0 398 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 SLITRK1Q96PX8 696 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 GCOM2Q9BZD3 368 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-235ENST00000616973 SETD4Q9NVD3 440 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 CWC15Q9P013 229 aaKnown RBP16.62■□□□□ 0.25
NR1H3-235ENST00000616973 R3HDM2Q9Y2K5 976 aaKnown RBP16.62■□□□□ 0.25
NR1H3-235ENST00000616973 GRIN2DO15399 1336 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 NRCAMQ92823 1304 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 MBLAC1A4D2B0 266 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-235ENST00000616973 F8VP50 259 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 EIF3HO15372 352 aaKnown RBP eCLIP16.62■□□□□ 0.25
NR1H3-235ENST00000616973 HMGCRP04035 888 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 IVDP26440 423 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 SSR1P43307 286 aaKnown RBP16.62■□□□□ 0.25
NR1H3-235ENST00000616973 GABRB2P47870 512 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 GNGT1P63211 74 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 CAV1Q03135 178 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 MAP2K5Q13163 448 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 ZNF268Q14587 947 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-235ENST00000616973 LLGL1Q15334 1064 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 CNGA2Q16280 664 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 CYP4A22Q5TCH4 519 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 DRICH1Q6PGQ1 229 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-235ENST00000616973 RHBDF2Q6PJF5 856 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 POLNQ7Z5Q5 900 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 SNF8Q96H20 258 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 TWNKQ96RR1 684 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 HEMGNQ9BXL5 484 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 TSPYL1Q9H0U9 437 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 CYTH4Q9UIA0 394 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 KIAA1257Q9ULG3 409 aa16.62■□□□□ 0.25
NR1H3-235ENST00000616973 BARX2Q9UMQ3 279 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-235ENST00000616973 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.62■□□□□ 0.25
NR1H3-235ENST00000616973 SMIM35A0A1B0GVV1 85 aa16.61■□□□□ 0.25
NR1H3-235ENST00000616973 TP73O15350 636 aa16.61■□□□□ 0.25
NR1H3-235ENST00000616973 GPR32O75388 356 aa16.61■□□□□ 0.25
NR1H3-235ENST00000616973 LMNB2Q03252 620 aa16.61■□□□□ 0.25
NR1H3-235ENST00000616973 DENND2CQ68D51 928 aa16.61■□□□□ 0.25
NR1H3-235ENST00000616973 HOOK3Q86VS8 718 aa16.61■□□□□ 0.25
NR1H3-235ENST00000616973 TMEM109Q9BVC6 243 aa16.61■□□□□ 0.25
NR1H3-235ENST00000616973 SCN1AP35498 2009 aa16.61■□□□□ 0.25
NR1H3-235ENST00000616973 TRIP12Q14669 1992 aaPredicted RBP16.61■□□□□ 0.25
NR1H3-235ENST00000616973 DYNC1LI2O43237 492 aaPredicted RBP16.6■□□□□ 0.25
NR1H3-235ENST00000616973 MICAL2O94851 1124 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 TJP3O95049 919 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 KRT1P04264 644 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 SMIM10L2AP0DMW4 78 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 SMIM10L2BP0DMW5 78 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 KRT3P12035 628 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 IFFO1Q0D2I5 559 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 SLC27A1Q6PCB7 646 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 ANKS1BQ7Z6G8 1248 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 TMEM130Q8N3G9 435 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 KAT2BQ92831 832 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 RNF25Q96BH1 459 aaPredicted RBP16.6■□□□□ 0.25
NR1H3-235ENST00000616973 HMGXB4Q9UGU5 601 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 ASIC3Q9UHC3 531 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms