RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	CCDC33	Q8N5R6	958 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	C7orf31	Q8N865	590 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	IFI44	Q8TCB0	444 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	TGFBRAP1	Q8WUH2	860 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	SDR42E1	Q8WUS8	393 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	ASB2	Q96Q27	587 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	DEPDC7	Q96QD5	511 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	TMEM39B	Q9GZU3	492 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	DENND2D	Q9H6A0	471 aa	Predicted RBP	10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	LY9	Q9HBG7	655 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	CNGB3	Q9NQW8	809 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	TRIM10	Q9UDY6	481 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	PNMA3	Q9UL41	463 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940	FZD1	Q9UP38	647 aa		10.15	□□□□□ -0.78
LRTOMT-222	ENST00000615940		A0A1B0GWJ7	208 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ACOD1	A6NK06	481 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CTNND1	O60716	968 aa	Known RBP	10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CLN5	O75503	358 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	KLHL2	O95198	593 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	GOSR1	O95249	250 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	BAG3	O95817	575 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ITGBL1	O95965	494 aa	Predicted RBP	10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ABCB1	P08183	1280 aa	Predicted RBP	10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CTSH	P09668	335 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ATP4A	P20648	1035 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	KRT9	P35527	623 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	DGKG	P49619	791 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	MLLT6	P55198	1093 aa	Predicted RBP	10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SPAG1	Q07617	926 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CSTF3	Q12996	717 aa	Known RBP	10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SCARB2	Q14108	478 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PTK2B	Q14289	1009 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	NR1D2	Q14995	579 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TMEM259	Q4ZIN3	620 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	BMP2KL	Q5H9B9	411 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TJAP1	Q5JTD0	557 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	XRRA1	Q6P2D8	792 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	C4orf50	Q6ZRC1	276 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ZNF589	Q86UQ0	364 aa	Predicted RBP	10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ERICH1	Q86X53	443 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	MAPKAPK5	Q8IW41	473 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ST13P4	Q8IZP2	240 aa	Predicted RBP	10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PPM1N	Q8N819	430 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	OR8K3	Q8NH51	312 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	AIDA	Q96BJ3	306 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	EFHD2	Q96C19	240 aa	Predicted RBP	10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ITPKC	Q96DU7	683 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CEP44	Q9C0F1	390 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	DEFB129	Q9H1M3	183 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	NEK6	Q9HC98	313 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	VCX3A	Q9NNX9	186 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	RRN3	Q9NYV6	651 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	FETUB	Q9UGM5	382 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SEC63	Q9UGP8	760 aa	Known RBP	10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TSC22D4	Q9Y3Q8	395 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ASB3	Q9Y575	518 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	RFX7	Q2KHR2	1363 aa		10.15	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	GPAA1	O43292	621 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SLU7	O95391	586 aa	Known RBP	10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	POLR3D	P05423	398 aa	Predicted RBP	10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PRKAR1A	P10644	381 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ATF4	P18848	351 aa	Predicted RBP	10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	GUCY1A2	P33402	732 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	HAND2	P61296	217 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TFAP4	Q01664	338 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	EVX2	Q03828	476 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	GALNT1	Q10472	559 aa	Predicted RBP	10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	MINDY4	Q4G0A6	757 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ATP13A4	Q4VNC1	1196 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	XKR3	Q5GH77	459 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	GRTP1	Q5TC63	336 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	KANK2	Q63ZY3	851 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PDPK2P	Q6A1A2	396 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	RAB12	Q6IQ22	244 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TTC23L	Q6PF05	361 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	WDR49	Q8IV35	697 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	OR6S1	Q8NH40	331 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	HSPH1	Q92598	858 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TSNARE1	Q96NA8	513 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	RMDN3	Q96TC7	470 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TBCB	Q99426	244 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	NDN	Q99608	321 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	MRM3	Q9HC36	420 aa	Known RBP	10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	GPRC5B	Q9NZH0	403 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TMOD2	Q9NZR1	351 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ASIC3	Q9UHC3	531 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SLC7A8	Q9UHI5	535 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SAP30BP	Q9UHR5	308 aa	Known RBP	10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	DCTN4	Q9UJW0	460 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	DMTF1	Q9Y222	760 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	LAMA4	Q16363	1823 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ELP1	O95163	1332 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	WDR19	Q8NEZ3	1342 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PITPNM2	Q9BZ72	1349 aa		10.14	□□□□□ -0.79
LRTOMT-222	ENST00000615940		A0A1W2PQ67	120 aa		10.13	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CCDC78	A2IDD5	438 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms