RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 PABPC1LQ4VXU2 614 aaKnown RBP17.93■□□□□ 0.46
CBWD3-211ENST00000615061 DPH6Q7L8W6 267 aa17.93■□□□□ 0.46
CBWD3-211ENST00000615061 ZC3H3Q8IXZ2 948 aaKnown RBP17.93■□□□□ 0.46
CBWD3-211ENST00000615061 DHTKD1Q96HY7 919 aaPredicted RBP17.93■□□□□ 0.46
CBWD3-211ENST00000615061 ACBD6Q9BR61 282 aa17.93■□□□□ 0.46
CBWD3-211ENST00000615061 CORO1BQ9BR76 489 aa17.93■□□□□ 0.46
CBWD3-211ENST00000615061 GTPBP4Q9BZE4 634 aaKnown RBP17.93■□□□□ 0.46
CBWD3-211ENST00000615061 DNAJC25Q9H1X3 360 aa17.93■□□□□ 0.46
CBWD3-211ENST00000615061 CLSTN2Q9H4D0 955 aa17.93■□□□□ 0.46
CBWD3-211ENST00000615061 CTNND2Q9UQB3 1225 aa17.93■□□□□ 0.46
CBWD3-211ENST00000615061 PI4K2BG5E9Z4 385 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 DCXO43602 365 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 ATP2C2O75185 946 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 LRRN2O75325 713 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 RHOP08100 348 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 STX17P56962 302 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 FKBP3Q00688 224 aaKnown RBP17.92■□□□□ 0.46
CBWD3-211ENST00000615061 MYL7Q01449 175 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 TSPY1Q01534 308 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 ZNF699Q32M78 642 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 SPOPLQ6IQ16 392 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 ZDHHC14Q8IZN3 488 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 NELFBQ8WX92 580 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 SYAP1Q96A49 352 aaPredicted RBP17.92■□□□□ 0.46
CBWD3-211ENST00000615061 ACSF2Q96CM8 615 aaPredicted RBP17.92■□□□□ 0.46
CBWD3-211ENST00000615061 GBP4Q96PP9 640 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 PKMYT1Q99640 499 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 SEPT5Q99719 369 aaPredicted RBP17.92■□□□□ 0.46
CBWD3-211ENST00000615061 DUSP9Q99956 384 aaKnown RBP17.92■□□□□ 0.46
CBWD3-211ENST00000615061 MKNK1Q9BUB5 465 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 ABI2Q9NYB9 513 aaPredicted RBP17.92■□□□□ 0.46
CBWD3-211ENST00000615061 GTF3C4Q9UKN8 822 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 MAFFQ9ULX9 164 aa17.92■□□□□ 0.46
CBWD3-211ENST00000615061 MYBPHLA2RUH7 354 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 STAU1O95793 577 aaKnown RBP17.91■□□□□ 0.46
CBWD3-211ENST00000615061 HLA-DRAP01903 254 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 PDGFRBP09619 1106 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 EPB41P11171 864 aaKnown RBP17.91■□□□□ 0.46
CBWD3-211ENST00000615061 CCR2P41597 374 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 RAP1GAPP47736 663 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 LHX1P48742 406 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 PSMC1P62191 440 aaKnown RBP17.91■□□□□ 0.46
CBWD3-211ENST00000615061 TNNC1P63316 161 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 INTS6LQ5JSJ4 861 aaKnown RBP17.91■□□□□ 0.46
CBWD3-211ENST00000615061 TTI2Q6NXR4 508 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 POTEHQ6S545 545 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 SCARA5Q6ZMJ2 495 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 HS6ST3Q8IZP7 471 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 TAS1R2Q8TE23 839 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 ING5Q8WYH8 240 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 TCEAL4Q96EI5 215 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 PI4K2AQ9BTU6 479 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 SMOC2Q9H3U7 446 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 SMYD3Q9H7B4 428 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 WDFY4Q6ZS81 3184 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 PTPRDP23468 1912 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 PTPN2P17706 415 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 WARSP23381 471 aaKnown RBP17.91■□□□□ 0.46
CBWD3-211ENST00000615061 ATICP31939 592 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 PIK3CAP42336 1068 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 CDH8P55286 799 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 MGAT5BQ3V5L5 792 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 DCP1BQ8IZD4 617 aaKnown RBP17.91■□□□□ 0.46
CBWD3-211ENST00000615061 GPT2Q8TD30 523 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 LPIN3Q9BQK8 851 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 VRTNQ9H8Y1 702 aa17.91■□□□□ 0.46
CBWD3-211ENST00000615061 ATF6P18850 670 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 MCCD1P59942 119 aaPredicted RBP17.9■□□□□ 0.46
CBWD3-211ENST00000615061 DCAF17Q5H9S7 520 aaPredicted RBP17.9■□□□□ 0.46
CBWD3-211ENST00000615061 ZNF667Q5HYK9 610 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 PLCD3Q8N3E9 789 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 STKLD1Q8NE28 680 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 OR6B3Q8NGW1 331 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 SPATA18Q8TC71 538 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 GPR152Q8TDT2 470 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 RSAD2Q8WXG1 361 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 FGF13Q92913 245 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 ZNF512Q96ME7 567 aaPredicted RBP17.9■□□□□ 0.46
CBWD3-211ENST00000615061 SYT15Q9BQS2 421 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 SDCBP2Q9H190 292 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 C11orf16Q9NQ32 467 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 CRTAC1Q9NQ79 661 aa17.9■□□□□ 0.46
CBWD3-211ENST00000615061 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.9■□□□□ 0.46
CBWD3-211ENST00000615061 MRPS23Q9Y3D9 190 aaKnown RBP17.9■□□□□ 0.46
CBWD3-211ENST00000615061 FAM86C2PA6NEL3 165 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 SLC16A3O15427 465 aaKnown RBP17.89■□□□□ 0.45
CBWD3-211ENST00000615061 TACC1O75410 805 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 ASS1P00966 412 aaKnown RBP17.89■□□□□ 0.45
CBWD3-211ENST00000615061 LAMP2P13473 410 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 ALADP13716 330 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 PCSK1P29120 753 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 PPP1R2P41236 205 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 ALDH1A3P47895 512 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 GPR15P49685 360 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 PAK1Q13153 545 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 PTPN21Q16825 1174 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 TCERG1LQ5VWI1 586 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 IQCEQ6IPM2 695 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 ELMOD1Q8N336 334 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 TRIML1Q8N9V2 468 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms