RNA–Protein interactions for RNA: ENST00000611852.4

CCDC28A-202, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-202ENST00000611852 CCDC150Q8NCX0 1101 aa17.71■□□□□ 0.43
CCDC28A-202ENST00000611852 CMASQ8NFW8 434 aaPredicted RBP17.71■□□□□ 0.43
CCDC28A-202ENST00000611852 SLC7A14Q8TBB6 771 aa17.71■□□□□ 0.43
CCDC28A-202ENST00000611852 FEZF2Q8TBJ5 459 aa17.71■□□□□ 0.43
CCDC28A-202ENST00000611852 PGLYRP2Q96PD5 576 aa17.71■□□□□ 0.43
CCDC28A-202ENST00000611852 ANP32EQ9BTT0 268 aa17.71■□□□□ 0.43
CCDC28A-202ENST00000611852 FUCA2Q9BTY2 467 aa17.71■□□□□ 0.43
CCDC28A-202ENST00000611852 SDCBP2Q9H190 292 aa17.71■□□□□ 0.43
CCDC28A-202ENST00000611852 ADAM7Q9H2U9 754 aa17.71■□□□□ 0.43
CCDC28A-202ENST00000611852 SMYD3Q9H7B4 428 aa17.71■□□□□ 0.43
CCDC28A-202ENST00000611852 MAFFQ9ULX9 164 aa17.71■□□□□ 0.43
CCDC28A-202ENST00000611852 NME7Q9Y5B8 376 aa17.71■□□□□ 0.43
CCDC28A-202ENST00000611852 CCDC195A0A1B0GUA6 201 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 MTMR11A4FU01 709 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 P4HA2O15460 535 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 PAPLNO95428 1278 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 SEC24AO95486 1093 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 AFPP02771 609 aaKnown RBP17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 PCSK1P29120 753 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 GNL1P36915 607 aaPredicted RBP17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 RAP1GAPP47736 663 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 CDH8P55286 799 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 PUS10Q3MIT2 529 aaKnown RBP17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 ANO6Q4KMQ2 910 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 RTL10Q7L3V2 364 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 PKMYT1Q99640 499 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 BCO2Q9BYV7 579 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 NIF3L1Q9GZT8 377 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 SNX25Q9H3E2 840 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 CYP4F11Q9HBI6 524 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 ZDHHC7Q9NXF8 308 aa17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 USP15Q9Y4E8 981 aaPredicted RBP17.7■□□□□ 0.42
CCDC28A-202ENST00000611852 ELF1P32519 619 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 MTIF2P46199 727 aaKnown RBP17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 TSPY1Q01534 308 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 MYL5Q02045 173 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 WDR44Q5JSH3 913 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 INTS6LQ5JSJ4 861 aaKnown RBP17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 PPM1LQ5SGD2 360 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 CES5AQ6NT32 575 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 CCDC149Q6ZUS6 474 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 GPR149Q86SP6 731 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 DCP1BQ8IZD4 617 aaKnown RBP17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 OR6B3Q8NGW1 331 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 SUSD6Q92537 303 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 ZNF707Q96C28 371 aaPredicted RBP17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 CRISPLD1Q9H336 500 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 TMLHEQ9NVH6 421 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 MAGEC2Q9UBF1 373 aaPredicted RBP17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 CDH22Q9UJ99 828 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 CDH9Q9ULB4 789 aa17.69■□□□□ 0.42
CCDC28A-202ENST00000611852 KCNJ18B7U540 433 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 PRRG1O14668 218 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 PDGFRBP09619 1106 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 HNRNPA1P09651 372 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 WEE2P0C1S8 567 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 HOXA9P31269 272 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 CDR1P51861 262 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 CETN1Q12798 172 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 SMARCB1Q12824 385 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 KCNJ12Q14500 433 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 SMAD2Q15796 467 aaKnown RBP17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 ZSCAN23Q3MJ62 389 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 CDKAL1Q5VV42 579 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 ATAD1Q8NBU5 361 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 LMO3Q8TAP4 145 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 TATDN2Q93075 761 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 FAXDC2Q96IV6 333 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 SYT15Q9BQS2 421 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 PRKD2Q9BZL6 878 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 NAT10Q9H0A0 1025 aaKnown RBP17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 FANCLQ9NW38 375 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 GTF3C4Q9UKN8 822 aa17.68■□□□□ 0.42
CCDC28A-202ENST00000611852 MYBPHLA2RUH7 354 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 A8MXQ7 604 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 ATP2C2O75185 946 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 BMP1P13497 986 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 IL9P15248 144 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 EEF1GP26641 437 aaKnown RBP17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 PSMC1P62191 440 aaKnown RBP17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 DUSP4Q13115 394 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 NCAPHQ15003 741 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 MAN2A1Q16706 1144 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 CCDC142Q17RM4 750 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 TCP11X2Q5H9J9 407 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 FAM171BQ6P995 826 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 C2orf15Q8WU43 125 aaKnown RBP17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 BPIFA3Q9BQP9 254 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 TUBGCP2Q9BSJ2 902 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 RHOBTB2Q9BYZ6 727 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 CYP3A43Q9HB55 503 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 CRTAC1Q9NQ79 661 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 INSL5Q9Y5Q6 135 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 INCA1Q0VD86 236 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 CBX2Q14781 532 aaPredicted RBP17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 NFE2Q16621 373 aaPredicted RBP17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 ATAT1Q5SQI0 421 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 CYP26C1Q6V0L0 522 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 AOPEPQ8N6M6 819 aa17.67■□□□□ 0.42
CCDC28A-202ENST00000611852 TTC9BQ8N6N2 239 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms