RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 PTPN2P17706 415 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 ATICP31939 592 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 LRRC63Q05C16 580 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 ZNF699Q32M78 642 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 ZACNQ401N2 412 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 LIMS2Q7Z4I7 341 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 ACBD6Q9BR61 282 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 CORO1BQ9BR76 489 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 MKNK1Q9BUB5 465 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 TMLHEQ9NVH6 421 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 ABI2Q9NYB9 513 aaPredicted RBP27.89■■■□□ 2.06
VEGFA-226ENST00000611736 KIAA1468Q9P260 1216 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 PPP1R3GB7ZBB8 358 aa27.88■■■□□ 2.05
VEGFA-226ENST00000611736 GABRDO14764 452 aa27.88■■■□□ 2.05
VEGFA-226ENST00000611736 STAU1O95793 577 aaKnown RBP27.88■■■□□ 2.05
VEGFA-226ENST00000611736 RHOP08100 348 aa27.88■■■□□ 2.05
VEGFA-226ENST00000611736 PPP1R2P41236 205 aa27.88■■■□□ 2.05
VEGFA-226ENST00000611736 GCLMP48507 274 aa27.88■■■□□ 2.05
VEGFA-226ENST00000611736 FKBP3Q00688 224 aaKnown RBP27.88■■■□□ 2.05
VEGFA-226ENST00000611736 INTS6LQ5JSJ4 861 aaKnown RBP27.88■■■□□ 2.05
VEGFA-226ENST00000611736 ITFG1Q8TB96 612 aa27.88■■■□□ 2.05
VEGFA-226ENST00000611736 ZNF512Q96ME7 567 aaPredicted RBP27.88■■■□□ 2.05
VEGFA-226ENST00000611736 SEPT5Q99719 369 aaPredicted RBP27.88■■■□□ 2.05
VEGFA-226ENST00000611736 MRPL45Q9BRJ2 306 aaKnown RBP27.88■■■□□ 2.05
VEGFA-226ENST00000611736 LMBRD1Q9NUN5 540 aa27.88■■■□□ 2.05
VEGFA-226ENST00000611736 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.88■■■□□ 2.054e-7■■■■■ 28.5
VEGFA-226ENST00000611736 CEP72Q9P209 647 aa27.88■■■□□ 2.05
VEGFA-226ENST00000611736 CTNND2Q9UQB3 1225 aa27.88■■■□□ 2.05
VEGFA-226ENST00000611736 WARSP23381 471 aaKnown RBP27.87■■■□□ 2.05
VEGFA-226ENST00000611736 PCSK1P29120 753 aa27.87■■■□□ 2.05
VEGFA-226ENST00000611736 PIK3CAP42336 1068 aa27.87■■■□□ 2.05
VEGFA-226ENST00000611736 ALDH1A3P47895 512 aa27.87■■■□□ 2.05
VEGFA-226ENST00000611736 PPP3CAQ08209 521 aa27.87■■■□□ 2.05
VEGFA-226ENST00000611736 PLD1Q13393 1074 aa27.87■■■□□ 2.05
VEGFA-226ENST00000611736 MGAT5BQ3V5L5 792 aa27.87■■■□□ 2.05
VEGFA-226ENST00000611736 IQCEQ6IPM2 695 aa27.87■■■□□ 2.05
VEGFA-226ENST00000611736 ZC3H3Q8IXZ2 948 aaKnown RBP27.87■■■□□ 2.05
VEGFA-226ENST00000611736 NELFBQ8WX92 580 aa27.87■■■□□ 2.05
VEGFA-226ENST00000611736 CLSTN2Q9H4D0 955 aa27.87■■■□□ 2.05
VEGFA-226ENST00000611736 MRPS23Q9Y3D9 190 aaKnown RBP27.87■■■□□ 2.05
VEGFA-226ENST00000611736 HLA-DRAP01903 254 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 PDGFRBP09619 1106 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 LMO2P25791 158 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 EPHB3P54753 998 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 ENPEPQ07075 957 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 SMARCB1Q12824 385 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 PTPN21Q16825 1174 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 CCDC142Q17RM4 750 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 SLC5A9Q2M3M2 681 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 SCARA5Q6ZMJ2 495 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 HS6ST3Q8IZP7 471 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 SPPL2BQ8TCT7 592 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 C2orf15Q8WU43 125 aaKnown RBP27.86■■■□□ 2.05
VEGFA-226ENST00000611736 ING5Q8WYH8 240 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 SNX25Q9H3E2 840 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 VRTNQ9H8Y1 702 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.86■■■□□ 2.057e-7■■■■□ 19.4
VEGFA-226ENST00000611736 EPS15L1Q9UBC2 864 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 GTF3C4Q9UKN8 822 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 PCDHB5Q9Y5E4 795 aa27.86■■■□□ 2.05
VEGFA-226ENST00000611736 SLC16A3O15427 465 aaKnown RBP27.85■■■□□ 2.05
VEGFA-226ENST00000611736 TUFMP49411 452 aaKnown RBP27.85■■■□□ 2.05
VEGFA-226ENST00000611736 PSMC1P62191 440 aaKnown RBP27.85■■■□□ 2.05
VEGFA-226ENST00000611736 NFE2Q16621 373 aaPredicted RBP27.85■■■□□ 2.05
VEGFA-226ENST00000611736 ZNF667Q5HYK9 610 aa27.85■■■□□ 2.05
VEGFA-226ENST00000611736 TRIML1Q8N9V2 468 aa27.85■■■□□ 2.05
VEGFA-226ENST00000611736 OR6B3Q8NGW1 331 aa27.85■■■□□ 2.05
VEGFA-226ENST00000611736 FGF13Q92913 245 aa27.85■■■□□ 2.05
VEGFA-226ENST00000611736 SYT15Q9BQS2 421 aa27.85■■■□□ 2.05
VEGFA-226ENST00000611736 DNAJC25Q9H1X3 360 aa27.85■■■□□ 2.05
VEGFA-226ENST00000611736 SMYD3Q9H7B4 428 aa27.85■■■□□ 2.05
VEGFA-226ENST00000611736 HSFX1Q9UBD0 423 aa27.85■■■□□ 2.05
VEGFA-226ENST00000611736 CDH7Q9ULB5 785 aa27.85■■■□□ 2.05
VEGFA-226ENST00000611736 FAM86C2PA6NEL3 165 aa27.84■■■□□ 2.05
VEGFA-226ENST00000611736 ATP2C2O75185 946 aa27.84■■■□□ 2.05
VEGFA-226ENST00000611736 TACC1O75410 805 aa27.84■■■□□ 2.05
VEGFA-226ENST00000611736 LAMP2P13473 410 aa27.84■■■□□ 2.05
VEGFA-226ENST00000611736 GNL1P36915 607 aaPredicted RBP27.84■■■□□ 2.05
VEGFA-226ENST00000611736 SGSM1Q2NKQ1 1148 aa27.84■■■□□ 2.05
VEGFA-226ENST00000611736 PDZD4Q76G19 769 aaPredicted RBP27.84■■■□□ 2.05
VEGFA-226ENST00000611736 TCEAL4Q96EI5 215 aa27.84■■■□□ 2.05
VEGFA-226ENST00000611736 PKMYT1Q99640 499 aa27.84■■■□□ 2.05
VEGFA-226ENST00000611736 DUSP9Q99956 384 aaKnown RBP27.84■■■□□ 2.05
VEGFA-226ENST00000611736 PI4K2AQ9BTU6 479 aa27.84■■■□□ 2.05
VEGFA-226ENST00000611736 TMEM8AQ9HCN3 771 aa27.84■■■□□ 2.05
VEGFA-226ENST00000611736 ASAH2Q9NR71 780 aa27.84■■■□□ 2.05
VEGFA-226ENST00000611736 CDH9Q9ULB4 789 aa27.84■■■□□ 2.05
VEGFA-226ENST00000611736 MYBPHLA2RUH7 354 aa27.83■■■□□ 2.05
VEGFA-226ENST00000611736 HAPLN1P10915 354 aaPredicted RBP27.83■■■□□ 2.05
VEGFA-226ENST00000611736 MYL4P12829 197 aa27.83■■■□□ 2.05
VEGFA-226ENST00000611736 RAP1GAPP47736 663 aa27.83■■■□□ 2.05
VEGFA-226ENST00000611736 STX17P56962 302 aa27.83■■■□□ 2.05
VEGFA-226ENST00000611736 DCAF17Q5H9S7 520 aaPredicted RBP27.83■■■□□ 2.05
VEGFA-226ENST00000611736 CYP4A22Q5TCH4 519 aa27.83■■■□□ 2.05
VEGFA-226ENST00000611736 SPOPLQ6IQ16 392 aa27.83■■■□□ 2.05
VEGFA-226ENST00000611736 TTI2Q6NXR4 508 aa27.83■■■□□ 2.05
VEGFA-226ENST00000611736 ST13P5Q8NFI4 369 aaPredicted RBP27.83■■■□□ 2.05
VEGFA-226ENST00000611736 FAM200AQ8TCP9 573 aa27.83■■■□□ 2.05
VEGFA-226ENST00000611736 TAS1R2Q8TE23 839 aa27.83■■■□□ 2.05
VEGFA-226ENST00000611736 LPIN3Q9BQK8 851 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms