RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CYP26C1Q6V0L0 522 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 TTC39CQ8N584 583 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 CMASQ8NFW8 434 aaPredicted RBP15.25■□□□□ 0.03
CTSA-219ENST00000607841 KBTBD7Q8WVZ9 684 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 SEMA4DQ92854 862 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 MRPL45Q9BRJ2 306 aaKnown RBP15.25■□□□□ 0.03
CTSA-219ENST00000607841 TUBGCP2Q9BSJ2 902 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 FUCA2Q9BTY2 467 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 ADAM7Q9H2U9 754 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 FAM124BQ9H5Z6 455 aaPredicted RBP15.25■□□□□ 0.03
CTSA-219ENST00000607841 CYP4F11Q9HBI6 524 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 FANCLQ9NW38 375 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 BECN2A8MW95 431 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 A8MXQ7 604 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 ZMYND10O75800 440 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 HNRNPA1P09651 372 aaKnown RBP eCLIP15.24■□□□□ 0.03
CTSA-219ENST00000607841 OR4Q2P0C623 313 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 HOXA9P31269 272 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 ASPAP45381 313 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 SMAD4Q13485 552 aaKnown RBP15.24■□□□□ 0.03
CTSA-219ENST00000607841 VWA3BQ502W6 1294 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 HSP90AA4PQ58FG1 418 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 INTS6LQ5JSJ4 861 aaKnown RBP15.24■□□□□ 0.03
CTSA-219ENST00000607841 CDKAL1Q5VV42 579 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 SCARA5Q6ZMJ2 495 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 RNF19BQ6ZMZ0 732 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 OSTM1Q86WC4 334 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 TCEAL8Q8IYN2 117 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 SMRP1Q8NCR6 262 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 SLC7A14Q8TBB6 771 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 PGLYRP2Q96PD5 576 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 TMEM209Q96SK2 561 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 SMYD3Q9H7B4 428 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 APOBEC3GQ9HC16 384 aaKnown RBP15.24■□□□□ 0.03
CTSA-219ENST00000607841 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.24■□□□□ 0.03
CTSA-219ENST00000607841 HSFX1Q9UBD0 423 aa15.24■□□□□ 0.03
CTSA-219ENST00000607841 CCDC195A0A1B0GUA6 201 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 GTPBP10A4D1E9 387 aaKnown RBP15.23■□□□□ 0.03
CTSA-219ENST00000607841 PDGFRBP09619 1106 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 CDK11BP21127 795 aaKnown RBP15.23■□□□□ 0.03
CTSA-219ENST00000607841 TBXAS1P24557 533 aaPredicted RBP15.23■□□□□ 0.03
CTSA-219ENST00000607841 ACAT1P24752 427 aaKnown RBP15.23■□□□□ 0.03
CTSA-219ENST00000607841 LMO2P25791 158 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 TUFMP49411 452 aaKnown RBP15.23■□□□□ 0.03
CTSA-219ENST00000607841 CDH8P55286 799 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 TFF2Q03403 129 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 CLUL1Q15846 466 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 ATAT1Q5SQI0 421 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 RARS2Q5T160 578 aaKnown RBP15.23■□□□□ 0.03
CTSA-219ENST00000607841 TMC5Q6UXY8 1006 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 UNC93AQ86WB7 457 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.23■□□□□ 0.03
CTSA-219ENST00000607841 AOPEPQ8N6M6 819 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 C12orf76Q8N812 135 aaPredicted RBP15.23■□□□□ 0.03
CTSA-219ENST00000607841 EHBP1Q8NDI1 1231 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 SPPL2BQ8TCT7 592 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 ELMO3Q96BJ8 720 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 TNIP3Q96KP6 325 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 RIPOR3Q96MK2 946 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 NECTIN4Q96NY8 510 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 NT5C1BQ96P26 610 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 SYT15Q9BQS2 421 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 BCO2Q9BYV7 579 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 RHOBTB2Q9BYZ6 727 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 PRKD2Q9BZL6 878 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 S1PR5Q9H228 398 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 NDST4Q9H3R1 872 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 PCDHB5Q9Y5E4 795 aa15.23■□□□□ 0.03
CTSA-219ENST00000607841 PRUNE2Q8WUY3 3088 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 MTMR11A4FU01 709 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 PES1O00541 588 aaKnown RBP15.22■□□□□ 0.03
CTSA-219ENST00000607841 XYLBO75191 536 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 LRG1P02750 347 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 WEE2P0C1S8 567 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 MTHFRP42898 656 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 RAP1GAPP47736 663 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 YWHAEP62258 255 aaKnown RBP15.22■□□□□ 0.03
CTSA-219ENST00000607841 TPM4P67936 248 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 DUSP4Q13115 394 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 PLD1Q13393 1074 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 PTCRAQ6ISU1 281 aaPredicted RBP15.22■□□□□ 0.03
CTSA-219ENST00000607841 FAM171BQ6P995 826 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 GBP6Q6ZN66 633 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 C4orf50Q6ZRC1 276 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 GPR149Q86SP6 731 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 LRRTM3Q86VH5 581 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.22■□□□□ 0.03
CTSA-219ENST00000607841 TATDN2Q93075 761 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 FAM81BQ96LP2 452 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 ASB2Q96Q27 587 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 APOL5Q9BWW9 433 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 PIDD1Q9HB75 910 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 GTF3C4Q9UKN8 822 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 MYO7AQ13402 2215 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 SCN1AP35498 2009 aa15.22■□□□□ 0.03
CTSA-219ENST00000607841 VWA8A3KMH1 1905 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 MYBPHLA2RUH7 354 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 GRXCR2A6NFK2 248 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 MBTPS2O43462 519 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 LRRN2O75325 713 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms