RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	ZFYVE26	Q68DK2	2539 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	XPOT	O43592	962 aa	Known RBP	19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	ATG13	O75143	517 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	F11	P03951	625 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	NEK4	P51957	841 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	SLC12A3	P55017	1021 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	PPP2R3A	Q06190	1150 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	RUNX3	Q13761	415 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	PTPA	Q15257	358 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	CCDC6	Q16204	474 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	KRT79	Q5XKE5	535 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	DSTYK	Q6XUX3	929 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	DUSP15	Q9H1R2	295 aa	Predicted RBP	19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	GKN1	Q9NS71	199 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	ASPM	Q8IZT6	3477 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	ANAPC1	Q9H1A4	1944 aa		19.84	■□□□□ 0.77
IRF3-231	ENST00000602190	OGT	O15294	1046 aa		19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	ODC1	P11926	461 aa		19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	HMGA1	P17096	107 aa	Known RBP	19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	PXN	P49023	591 aa	Predicted RBP	19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	SMTN	P53814	917 aa		19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	SMARCB1	Q12824	385 aa		19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	C9orf57	Q5W0N0	161 aa		19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	CD302	Q8IX05	232 aa		19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	C2orf15	Q8WU43	125 aa	Known RBP	19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	EZH1	Q92800	747 aa	Predicted RBP	19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	USP13	Q92995	863 aa	Predicted RBP	19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	FBRSL1	Q9HCM7	1045 aa	Known RBP	19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	THG1L	Q9NWX6	298 aa	Known RBP	19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	EBF1	Q9UH73	591 aa		19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	CPSF3	Q9UKF6	684 aa	Known RBP	19.83	■□□□□ 0.77
IRF3-231	ENST00000602190	NOL7	Q9UMY1	257 aa	Known RBP	19.83	■□□□□ 0.77
IRF3-231	ENST00000602190		A0A0B4J269	797 aa		19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	HAPLN1	P10915	354 aa	Predicted RBP	19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	SCP2	P22307	547 aa		19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	GRSF1	Q12849	480 aa	Known RBP eCLIP	19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	ZNF268	Q14587	947 aa	Predicted RBP	19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	ARSH	Q5FYA8	562 aa		19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	ARMCX5	Q6P1M9	558 aa		19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	KDF1	Q8NAX2	398 aa	Predicted RBP	19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	SMG9	Q9H0W8	520 aa	Known RBP	19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	KIF9	Q9HAQ2	790 aa		19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	CCL26	Q9Y258	94 aa		19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	DERA	Q9Y315	318 aa		19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	ABCA7	Q8IZY2	2146 aa		19.82	■□□□□ 0.76
IRF3-231	ENST00000602190	TNRC6B	Q9UPQ9	1833 aa	Known RBP	19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	HELZ	P42694	1942 aa	Known RBP	19.81	■□□□□ 0.76
IRF3-231	ENST00000602190		H0YCG3	227 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	RNF40	O75150	1001 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	EGF	P01133	1207 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	DDX6	P26196	483 aa	Known RBP eCLIP	19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	ZNF131	P52739	623 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	NLRP12	P59046	1061 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	HMGN5	P82970	282 aa	Known RBP	19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	VEPH1	Q14D04	833 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	FBXO43	Q4G163	708 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	JADE1	Q6IE81	842 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	SLC39A4	Q6P5W5	647 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	SYT13	Q7L8C5	426 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	LRRTM3	Q86VH5	581 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	SPPL2B	Q8TCT7	592 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	FIZ1	Q96SL8	496 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	SMOC1	Q9H4F8	434 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	LIMCH1	Q9UPQ0	1083 aa		19.81	■□□□□ 0.76
IRF3-231	ENST00000602190	PKD1L2	Q7Z442	2459 aa		19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	BCLAF3	A2AJT9	711 aa	Known RBP	19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	CCDC192	P0DO97	292 aa		19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	DRD1	P21728	446 aa		19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	TMEM119	Q4V9L6	283 aa		19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	CCDC83	Q8IWF9	413 aa		19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	EBF3	Q9H4W6	596 aa		19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	RPF1	Q9H9Y2	349 aa	Known RBP	19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	LARS	Q9P2J5	1176 aa	Known RBP	19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	DSE	Q9UL01	958 aa		19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	ODF2L	Q9ULJ1	636 aa		19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	SLC8A2	Q9UPR5	921 aa		19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	PLXND1	Q9Y4D7	1925 aa		19.8	■□□□□ 0.76
IRF3-231	ENST00000602190	AKAP13	Q12802	2813 aa		19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	TADA3	O75528	432 aa		19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	NFIC	P08651	508 aa		19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	ATP2C1	P98194	919 aa	Predicted RBP	19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	POU5F1	Q01860	360 aa	Known RBP	19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	RAD51AP2	Q09MP3	1159 aa		19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	KARS	Q15046	597 aa	Known RBP	19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	SLC39A12	Q504Y0	691 aa		19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	RNF43	Q68DV7	783 aa		19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	TRIM68	Q6AZZ1	485 aa		19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	TCEAL6	Q6IPX3	200 aa		19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	TCEAL3	Q969E4	200 aa		19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	SEPT5	Q99719	369 aa	Predicted RBP	19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	ASB7	Q9H672	318 aa		19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	TDP1	Q9NUW8	608 aa		19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	POLR3B	Q9NW08	1133 aa	Predicted RBP	19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	C2CD2	Q9Y426	696 aa		19.79	■□□□□ 0.76
IRF3-231	ENST00000602190	ASCC3	Q8N3C0	2202 aa	Known RBP	19.78	■□□□□ 0.76
IRF3-231	ENST00000602190	THADA	Q6YHU6	1953 aa		19.78	■□□□□ 0.76
IRF3-231	ENST00000602190	ARSA	P15289	507 aa		19.78	■□□□□ 0.76
IRF3-231	ENST00000602190	GJA4	P35212	333 aa		19.78	■□□□□ 0.76
IRF3-231	ENST00000602190	PDGFRL	Q15198	375 aa		19.78	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms