RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SLC35G2Q8TBE7 412 aa19.12■□□□□ 0.65
VRK3-225ENST00000601912 KBTBD7Q8WVZ9 684 aa19.12■□□□□ 0.65
VRK3-225ENST00000601912 ZNF653Q96CK0 615 aa19.12■□□□□ 0.65
VRK3-225ENST00000601912 VCPIP1Q96JH7 1222 aa19.12■□□□□ 0.65
VRK3-225ENST00000601912 PAAF1Q9BRP4 392 aa19.12■□□□□ 0.65
VRK3-225ENST00000601912 TBC1D13Q9NVG8 400 aa19.12■□□□□ 0.65
VRK3-225ENST00000601912 GTF3C4Q9UKN8 822 aa19.12■□□□□ 0.65
VRK3-225ENST00000601912 CAPN6Q9Y6Q1 641 aa19.12■□□□□ 0.65
VRK3-225ENST00000601912 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.11■□□□□ 0.65
VRK3-225ENST00000601912 FAM170AA1A519 330 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 ARHGEF37A1IGU5 675 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 AARSP49588 968 aaKnown RBP eCLIP19.11■□□□□ 0.65
VRK3-225ENST00000601912 ACOT1Q86TX2 421 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 PHF13Q86YI8 300 aaPredicted RBP19.11■□□□□ 0.65
VRK3-225ENST00000601912 NPAS4Q8IUM7 802 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 MCOLN2Q8IZK6 566 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 C3orf58Q8NDZ4 430 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 RABGGTAQ92696 567 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 TNIP3Q96KP6 325 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 CTTNBP2NLQ9P2B4 639 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 STXBP5LQ9Y2K9 1186 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 CDH5P33151 784 aaPredicted RBP19.11■□□□□ 0.65
VRK3-225ENST00000601912 DSC1Q08554 894 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 TCEAL1Q15170 157 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 LIN9Q5TKA1 542 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 WSCD1Q658N2 575 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 CRYBG2Q8N1P7 616 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 TMEM199Q8N511 208 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 ARHGEF26Q96DR7 871 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 MRPL9Q9BYD2 267 aaKnown RBP19.11■□□□□ 0.65
VRK3-225ENST00000601912 ADAM22Q9P0K1 906 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.11■□□□□ 0.65
VRK3-225ENST00000601912 JRKLQ9Y4A0 524 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 PCDHGC5Q9Y5F6 944 aa19.11■□□□□ 0.65
VRK3-225ENST00000601912 TTC3P53804 2025 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 TRIM43BA6NCK2 446 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 O00370 1275 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 FANCGO15287 622 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 PALMO75781 387 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 URI1O94763 535 aaPredicted RBP19.1■□□□□ 0.65
VRK3-225ENST00000601912 DDHD2O94830 711 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 CYP1A2P05177 515 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 PDGFRBP09619 1106 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 ODC1P11926 461 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 EN2P19622 333 aaPredicted RBP19.1■□□□□ 0.65
VRK3-225ENST00000601912 LHX1P48742 406 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 C1QBPQ07021 282 aaKnown RBP19.1■□□□□ 0.65
VRK3-225ENST00000601912 TIGD5Q53EQ6 642 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 LCLAT1Q6UWP7 414 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 ZNF280BQ86YH2 543 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 COLGALT2Q8IYK4 626 aa19.1■□□□□ 0.65
VRK3-225ENST00000601912 TRIM43Q96BQ3 446 aaPredicted RBP19.1■□□□□ 0.65
VRK3-225ENST00000601912 CNOT8Q9UFF9 292 aaKnown RBP19.1■□□□□ 0.65
VRK3-225ENST00000601912 ABHD14A-ACY1A0A1B0GW23 586 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 M0QYV0 167 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 MICAL2O94851 1124 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 IGFBP6P24592 240 aaPredicted RBP19.09■□□□□ 0.65
VRK3-225ENST00000601912 LMO2P25791 158 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 MFSD5Q6N075 450 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 DENND1BQ6P3S1 775 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 MON1BQ7L1V2 547 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 ERICH1Q86X53 443 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 METTL23Q86XA0 190 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 SYCE1Q8N0S2 351 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 CRIPAKQ8N1N5 446 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 MSANTD4Q8NCY6 345 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 C1orf131Q8NDD1 294 aaKnown RBP19.09■□□□□ 0.65
VRK3-225ENST00000601912 TPCN2Q8NHX9 752 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 SPATA18Q8TC71 538 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 CASD1Q96PB1 797 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 AVENQ9NQS1 362 aaPredicted RBP19.09■□□□□ 0.65
VRK3-225ENST00000601912 UVRAGQ9P2Y5 699 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 DSEQ9UL01 958 aa19.09■□□□□ 0.65
VRK3-225ENST00000601912 GABRDO14764 452 aa19.08■□□□□ 0.65
VRK3-225ENST00000601912 CALB1P05937 261 aa19.08■□□□□ 0.65
VRK3-225ENST00000601912 PFKMP08237 780 aa19.08■□□□□ 0.65
VRK3-225ENST00000601912 MMP8P22894 467 aa19.08■□□□□ 0.65
VRK3-225ENST00000601912 OR1G1P47890 313 aa19.08■□□□□ 0.65
VRK3-225ENST00000601912 HADHBP55084 474 aaKnown RBP19.08■□□□□ 0.65
VRK3-225ENST00000601912 PAN2Q504Q3 1202 aaKnown RBP19.08■□□□□ 0.65
VRK3-225ENST00000601912 MMS22LQ6ZRQ5 1243 aa19.08■□□□□ 0.65
VRK3-225ENST00000601912 C12orf29Q8N999 325 aa19.08■□□□□ 0.65
VRK3-225ENST00000601912 C11orf70Q9BRQ4 267 aa19.08■□□□□ 0.65
VRK3-225ENST00000601912 OSGEPQ9NPF4 335 aa19.08■□□□□ 0.65
VRK3-225ENST00000601912 DDX43Q9NXZ2 648 aaKnown RBP19.08■□□□□ 0.65
VRK3-225ENST00000601912 HESX1Q9UBX0 185 aa19.08■□□□□ 0.65
VRK3-225ENST00000601912 TSPAN16Q9UKR8 245 aa19.08■□□□□ 0.65
VRK3-225ENST00000601912 NME7Q9Y5B8 376 aa19.08■□□□□ 0.65
VRK3-225ENST00000601912 GRID2IPA4D2P6 1211 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 TMEM189-UBE2V1I3L0A0 370 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 M0QZQ0 153 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 EFCAB14O75071 495 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 CSF2RAP15509 400 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 TUBB2AQ13885 445 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 ARHGAP17Q68EM7 881 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 UBE2Q1Q7Z7E8 422 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 OSTM1Q86WC4 334 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 WDTC1Q8N5D0 677 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 TUBB2BQ9BVA1 445 aa19.08■□□□□ 0.64
VRK3-225ENST00000601912 NUP85Q9BW27 656 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms