RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 HLA-DRAP01903 254 aa11.63□□□□□ -0.55
ZNF558-207ENST00000601372 NCF2P19878 526 aaPredicted RBP11.63□□□□□ -0.55
ZNF558-207ENST00000601372 GARSP41250 739 aaKnown RBP11.63□□□□□ -0.55
ZNF558-207ENST00000601372 ICE2Q659A1 982 aa11.63□□□□□ -0.55
ZNF558-207ENST00000601372 NIPA1Q7RTP0 329 aa11.63□□□□□ -0.55
ZNF558-207ENST00000601372 CDKL2Q92772 493 aa11.63□□□□□ -0.55
ZNF558-207ENST00000601372 SYN2Q92777 582 aaPredicted RBP11.63□□□□□ -0.55
ZNF558-207ENST00000601372 MTMR8Q96EF0 704 aa11.63□□□□□ -0.55
ZNF558-207ENST00000601372 IFT43Q96FT9 208 aa11.63□□□□□ -0.55
ZNF558-207ENST00000601372 RAB27AP51159 221 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 VCX3BQ9H321 246 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 MEFVO15553 781 aaPredicted RBP11.62□□□□□ -0.55
ZNF558-207ENST00000601372 HTRA3P83110 453 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 KCNA10Q16322 511 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 EFHC2Q5JST6 749 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 RASAL3Q86YV0 1011 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
ZNF558-207ENST00000601372 UBA3Q8TBC4 463 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 TTC1Q99614 292 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 EMILIN2Q9BXX0 1053 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 AGPAT3Q9NRZ7 376 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 DMGDHQ9UI17 866 aaKnown RBP11.62□□□□□ -0.55
ZNF558-207ENST00000601372 ALG6Q9Y672 507 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 FAM153BP0C7A2 387 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 HSPA9P38646 679 aaKnown RBP11.62□□□□□ -0.55
ZNF558-207ENST00000601372 ST8SIA6P61647 398 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 FAM153CQ494X1 144 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 RHOT1Q8IXI2 618 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 MTMR12Q9C0I1 747 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 ABCF3Q9NUQ8 709 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 FAM153AQ9UHL3 310 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 ZFP69BQ9UJL9 534 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 TACC3Q9Y6A5 838 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 IQANK1A0A1B0GTG1 560 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 ARL4CP56559 192 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 NBPF20Q3BBV1 942 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 SLC5A5Q92911 643 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 CYFIP2Q96F07 1278 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 MCEEQ96PE7 176 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 KCND1Q9NSA2 647 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 ITGB4P16144 1822 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 OGTO15294 1046 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 TLL1O43897 1013 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 MRPS6P82932 125 aaKnown RBP11.62□□□□□ -0.55
ZNF558-207ENST00000601372 C10orf120Q5SQS8 335 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 ZC3H18Q86VM9 953 aaKnown RBP11.62□□□□□ -0.55
ZNF558-207ENST00000601372 HIPK3Q9H422 1215 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 BTBD7Q9P203 1132 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 NAGPAQ9UK23 515 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 MYBL1P10243 752 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 CTNNB1P35222 781 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 CENPPQ6IPU0 288 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 SDE2Q6IQ49 451 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 OTOP1Q7RTM1 612 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 KCTD17Q8N5Z5 321 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 SLC20A1Q8WUM9 679 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 PARVAQ9NVD7 372 aa11.62□□□□□ -0.55
ZNF558-207ENST00000601372 FOXN3O00409 490 aaPredicted RBP11.61□□□□□ -0.55
ZNF558-207ENST00000601372 ZBTB39O15060 712 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 TLR2O60603 784 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 FARP2O94887 1054 aaPredicted RBP11.61□□□□□ -0.55
ZNF558-207ENST00000601372 MDH1BQ5I0G3 518 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.61□□□□□ -0.55
ZNF558-207ENST00000601372 CYTH2Q99418 400 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 DDX20Q9UHI6 824 aaKnown RBP11.61□□□□□ -0.55
ZNF558-207ENST00000601372 AKAP3O75969 853 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 ITGA7Q13683 1181 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 SH2D4BQ5SQS7 431 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 PDIK1LQ8N165 341 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 SLC13A1Q9BZW2 595 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 RCCD1A6NED2 376 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 TMEM253P0C7T8 217 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 MUTP22033 750 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 COG7P83436 770 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 MEI1Q5TIA1 1274 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 AFAP1L2Q8N4X5 818 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 EPS8L3Q8TE67 593 aaKnown RBP11.61□□□□□ -0.55
ZNF558-207ENST00000601372 BHMTQ93088 406 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 LENG1Q96BZ8 264 aaPredicted RBP11.61□□□□□ -0.55
ZNF558-207ENST00000601372 SLITRK1Q96PX8 696 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 PRDM4Q9UKN5 801 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 C10orf71Q711Q0 1435 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 ERFP50548 548 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 SNRPFP62306 86 aaKnown RBP11.61□□□□□ -0.55
ZNF558-207ENST00000601372 ORC1Q13415 861 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 BZW1Q7L1Q6 419 aaKnown RBP11.61□□□□□ -0.55
ZNF558-207ENST00000601372 BRI3BPQ8WY22 251 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 C5P01031 1676 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 FAM200BP0CF97 657 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 NOP14P78316 857 aaKnown RBP11.61□□□□□ -0.55
ZNF558-207ENST00000601372 DHX35Q9H5Z1 703 aaKnown RBP11.61□□□□□ -0.55
ZNF558-207ENST00000601372 TMEM8AQ9HCN3 771 aa11.61□□□□□ -0.55
ZNF558-207ENST00000601372 ESRRAP11474 423 aaPredicted RBP11.6□□□□□ -0.55
ZNF558-207ENST00000601372 MYL4P12829 197 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 EPHB3P54753 998 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 SLC29A2Q14542 456 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 ADGRF2Q8IZF7 708 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 HIPK4Q8NE63 616 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 C9orf72Q96LT7 481 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 TTC25Q96NG3 672 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms