RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 FAM177A1Q8N128 213 aaPredicted RBP19.22■□□□□ 0.67
SSBP4-207ENST00000600244 FBXL16Q8N461 479 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 PNPLA1Q8N8W4 532 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 USP33Q8TEY7 942 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 CAMK1GQ96NX5 476 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 CCDC94Q9BW85 323 aaPredicted RBP19.22■□□□□ 0.67
SSBP4-207ENST00000600244 GTPBP2Q9BX10 602 aaKnown RBP19.22■□□□□ 0.67
SSBP4-207ENST00000600244 CAPN10Q9HC96 672 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 ZMYM5Q9UJ78 669 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 TNFSF13BQ9Y275 285 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 SHROOM3Q8TF72 1996 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 MTMR11A4FU01 709 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 FTH1P19P0C7X4 201 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 CDC25CP30307 473 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 ATXN3P54252 364 aaPredicted RBP19.21■□□□□ 0.67
SSBP4-207ENST00000600244 PSMD2Q13200 908 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 PDGFRLQ15198 375 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 FRMD1Q8N878 549 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 DEPTORQ8TB45 409 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 RLN3Q8WXF3 142 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 AGXT2Q9BYV1 514 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 ECT2Q9H8V3 914 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 NCOA5Q9HCD5 579 aaKnown RBP19.21■□□□□ 0.67
SSBP4-207ENST00000600244 DNAAF2Q9NVR5 837 aaKnown RBP19.21■□□□□ 0.67
SSBP4-207ENST00000600244 CNTN3Q9P232 1028 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 HSFX1Q9UBD0 423 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 TIMM13Q9Y5L4 95 aaPredicted RBP19.21■□□□□ 0.67
SSBP4-207ENST00000600244 RAI2Q9Y5P3 530 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 ADAMTS9Q9P2N4 1935 aa19.21■□□□□ 0.67
SSBP4-207ENST00000600244 OR6C75A6NL08 312 aa19.2■□□□□ 0.66
SSBP4-207ENST00000600244 BAG4O95429 457 aaKnown RBP19.2■□□□□ 0.66
SSBP4-207ENST00000600244 CFIP05156 583 aa19.2■□□□□ 0.66
SSBP4-207ENST00000600244 ATP2B1P20020 1258 aa19.2■□□□□ 0.66
SSBP4-207ENST00000600244 CRY1Q16526 586 aa19.2■□□□□ 0.66
SSBP4-207ENST00000600244 DUOXA1Q1HG43 343 aa19.2■□□□□ 0.66
SSBP4-207ENST00000600244 APBB1IPQ7Z5R6 666 aaPredicted RBP19.2■□□□□ 0.66
SSBP4-207ENST00000600244 MINDY1Q8N5J2 469 aa19.2■□□□□ 0.66
SSBP4-207ENST00000600244 TM6SF1Q9BZW5 370 aa19.2■□□□□ 0.66
SSBP4-207ENST00000600244 CDT1Q9H211 546 aa19.2■□□□□ 0.66
SSBP4-207ENST00000600244 PTPRHQ9HD43 1115 aa19.2■□□□□ 0.66
SSBP4-207ENST00000600244 PCDH15Q96QU1 1955 aa19.2■□□□□ 0.66
SSBP4-207ENST00000600244 ANTXRLA6NF34 631 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 MAP3K13O43283 966 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 SH3BP5O60239 455 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 SERPINF2P08697 491 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 HNRNPLP14866 589 aaKnown RBP eCLIP19.19■□□□□ 0.66
SSBP4-207ENST00000600244 ITPKAP23677 461 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 PDIA3P30101 505 aaKnown RBP19.19■□□□□ 0.66
SSBP4-207ENST00000600244 OSTNP61366 133 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 CCT2P78371 535 aaKnown RBP19.19■□□□□ 0.66
SSBP4-207ENST00000600244 GFPT1Q06210 699 aaPredicted RBP19.19■□□□□ 0.66
SSBP4-207ENST00000600244 LYSMD4Q5XG99 296 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 TMEM150AQ86TG1 271 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 SCUBE3Q8IX30 993 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 OR2I1PQ8NGU4 316 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 CCDC26Q8TAB7 109 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 CEP76Q8TAP6 659 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 AIFM3Q96NN9 605 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 NAP1L4Q99733 375 aaKnown RBP19.19■□□□□ 0.66
SSBP4-207ENST00000600244 LPIN3Q9BQK8 851 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 KIF9Q9HAQ2 790 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 TDP1Q9NUW8 608 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 MMP17Q9ULZ9 603 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 PCDHA12Q9UN75 941 aa19.19■□□□□ 0.66
SSBP4-207ENST00000600244 ATXN2Q99700 1313 aaKnown RBP19.19■□□□□ 0.66
SSBP4-207ENST00000600244 ATXN7O15265 892 aaPredicted RBP19.18■□□□□ 0.66
SSBP4-207ENST00000600244 DEXIO95424 95 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 LARGE1O95461 756 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 EFNA5P52803 228 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 SSRP1Q08945 709 aaKnown RBP19.18■□□□□ 0.66
SSBP4-207ENST00000600244 SLC14A1Q13336 389 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 MYBPC2Q14324 1141 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 MAP7D1Q3KQU3 841 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 TMEM92Q6UXU6 159 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 ZNF605Q86T29 641 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 SLCO6A1Q86UG4 719 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 TRIM22Q8IYM9 498 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 CPA6Q8N4T0 437 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 GCNAQ96QF7 691 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 KIF2CQ99661 725 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 KIFC3Q9BVG8 833 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 ZSWIM6Q9HCJ5 1215 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 KCNJ14Q9UNX9 436 aa19.18■□□□□ 0.66
SSBP4-207ENST00000600244 PTPRBP23467 1997 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 K7EQS6 105 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 GJB3O75712 270 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 SPATA31C1P0DKV0 1188 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 ATF6P18850 670 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 AVPR1AP37288 418 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 AARSP49588 968 aaKnown RBP eCLIP19.17■□□□□ 0.66
SSBP4-207ENST00000600244 EVCP57679 992 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 BFSP1Q12934 665 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 C2orf27AQ580R0 203 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 CC2D1AQ6P1N0 951 aaPredicted RBP19.17■□□□□ 0.66
SSBP4-207ENST00000600244 TOGARAM2Q6ZUX3 1019 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 LURAP1LQ8IV03 231 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 MAB21L3Q8N8X9 362 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 JAKMIP1Q96N16 626 aaKnown RBP19.17■□□□□ 0.66
SSBP4-207ENST00000600244 ACAP3Q96P50 834 aa19.17■□□□□ 0.66
SSBP4-207ENST00000600244 ACO2Q99798 780 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms