RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 GPS1Q13098 491 aa20.35■□□□□ 0.85
ARHGEF1-218ENST00000599589 DYNC1I2Q13409 638 aaKnown RBP20.35■□□□□ 0.85
ARHGEF1-218ENST00000599589 KAZNQ674X7 775 aa20.35■□□□□ 0.85
ARHGEF1-218ENST00000599589 SKA1Q96BD8 255 aa20.35■□□□□ 0.85
ARHGEF1-218ENST00000599589 RBM41Q96IZ5 413 aaKnown RBP20.35■□□□□ 0.85
ARHGEF1-218ENST00000599589 KLF6Q99612 283 aaPredicted RBP20.35■□□□□ 0.85
ARHGEF1-218ENST00000599589 MANSC1Q9H8J5 431 aa20.35■□□□□ 0.85
ARHGEF1-218ENST00000599589 SLC24A2Q9UI40 661 aa20.35■□□□□ 0.85
ARHGEF1-218ENST00000599589 DNPEPQ9ULA0 475 aa20.35■□□□□ 0.85
ARHGEF1-218ENST00000599589 USTQ9Y2C2 406 aa20.35■□□□□ 0.85
ARHGEF1-218ENST00000599589 C2orf71A6NGG8 1288 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 PYGLP06737 847 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 UNGP13051 313 aaPredicted RBP20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 PADI6Q6TGC4 694 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 TMEM120AQ9BXJ8 343 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 ZNF277Q9NRM2 450 aaPredicted RBP20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 ZNF148Q9UQR1 794 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 UMODL1Q5DID0 1318 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 PROSCO94903 275 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 LYNP07948 512 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 ERFP50548 548 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 PDIA2Q13087 525 aaKnown RBP20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 TTC7BQ86TV6 843 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 CBWD2Q8IUF1 395 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 RHOT1Q8IXI2 618 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 NT5C1BQ96P26 610 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 KCNK13Q9HB14 408 aa20.34■□□□□ 0.85
ARHGEF1-218ENST00000599589 CYP1A1P04798 512 aaPredicted RBP20.33■□□□□ 0.85
ARHGEF1-218ENST00000599589 KRT10P13645 584 aa20.33■□□□□ 0.85
ARHGEF1-218ENST00000599589 CDK16Q00536 496 aa20.33■□□□□ 0.85
ARHGEF1-218ENST00000599589 PTP4A2Q12974 167 aa20.33■□□□□ 0.85
ARHGEF1-218ENST00000599589 CCDC142Q17RM4 750 aa20.33■□□□□ 0.85
ARHGEF1-218ENST00000599589 CCDC62Q6P9F0 684 aa20.33■□□□□ 0.85
ARHGEF1-218ENST00000599589 TSSK1BQ9BXA7 367 aa20.33■□□□□ 0.85
ARHGEF1-218ENST00000599589 VPS33BQ9H267 617 aa20.33■□□□□ 0.85
ARHGEF1-218ENST00000599589 DMAP1Q9NPF5 467 aaPredicted RBP20.33■□□□□ 0.85
ARHGEF1-218ENST00000599589 AVENQ9NQS1 362 aaPredicted RBP20.33■□□□□ 0.85
ARHGEF1-218ENST00000599589 TOPORSQ9NS56 1045 aaPredicted RBP20.33■□□□□ 0.85
ARHGEF1-218ENST00000599589 LARSQ9P2J5 1176 aaKnown RBP20.33■□□□□ 0.85
ARHGEF1-218ENST00000599589 GOLGA8SH3BPF8 625 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 GOLGA8MH3BSY2 632 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 ALOX15BO15296 676 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 LIASO43766 372 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 DPEP1P16444 411 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 PGM1P36871 562 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 CPA2P48052 419 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 GEMIN4P57678 1058 aaKnown RBP20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 GSTA3Q16772 222 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 CNPY1Q3B7I2 92 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 RASIP1Q5U651 963 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 KRT39Q6A163 491 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 C12orf56Q8IXR9 622 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 TAS1R2Q8TE23 839 aa20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 UBE2OQ9C0C9 1292 aaKnown RBP20.33■□□□□ 0.84
ARHGEF1-218ENST00000599589 PI4K2BG5E9Z4 385 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 PSTPIP1O43586 416 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 GPX6P59796 221 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 EFHC2Q5JST6 749 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 AZIN2Q96A70 460 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 FAM81BQ96LP2 452 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 MMADHCQ9H3L0 296 aaPredicted RBP20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 SSU72Q9NP77 194 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 PMM2O15305 246 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 DNAJC6O75061 913 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 CFBP00751 764 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 RANBP1P43487 201 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 SPDYE2Q495Y8 402 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 SESTD1Q86VW0 696 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 KATNAL2Q8IYT4 538 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 FAM161BQ96MY7 647 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 NR1H4Q96RI1 486 aaPredicted RBP20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 TUBGCP5Q96RT8 1024 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 DDX43Q9NXZ2 648 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 ARMCX1Q9P291 453 aa20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 ZBTB12Q9Y330 459 aaPredicted RBP20.32■□□□□ 0.84
ARHGEF1-218ENST00000599589 DDX39AO00148 427 aaKnown RBP20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 RARBP10826 455 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 PSME4Q14997 1843 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 IZUMO2Q6UXV1 221 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 CENPUQ71F23 418 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 ZNF577Q9BSK1 485 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 RABGEF1Q9UJ41 708 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 PRR12Q9ULL5 1215 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 MTO1Q9Y2Z2 717 aaKnown RBP20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 MYPNQ86TC9 1320 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 A8MXQ7 604 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 SSTR1P30872 391 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 GPC3P51654 580 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 MCL1Q07820 350 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 TFDP1Q14186 410 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 SNRNP35Q16560 246 aaKnown RBP20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 ATP13A4Q4VNC1 1196 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 PI4K2AQ9BTU6 479 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 ASCC2Q9H1I8 757 aaPredicted RBP20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 ANGPTL2Q9UKU9 493 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 TMX2Q9Y320 296 aa20.31■□□□□ 0.84
ARHGEF1-218ENST00000599589 ARP10275 920 aa20.3■□□□□ 0.84
ARHGEF1-218ENST00000599589 ECE1P42892 770 aa20.3■□□□□ 0.84
ARHGEF1-218ENST00000599589 KRT72Q14CN4 511 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms