RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 HCN4Q9Y3Q4 1203 aa19.85■□□□□ 0.77
SHKBP1-202ENST00000593764 R3HCC1Q9Y3T6 440 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-202ENST00000593764 KIF20AO95235 890 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 SRFP11831 508 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 ACAT1P24752 427 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 LHX1P48742 406 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 TUFMP49411 452 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 NFIL3Q16649 462 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 MTSS1LQ765P7 747 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 DNAJB7Q7Z6W7 309 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 LEMD2Q8NC56 503 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 SPATA20Q8TB22 786 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 SPPL2BQ8TCT7 592 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 PSMG2Q969U7 264 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 CCDC34Q96HJ3 373 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 TIGD1Q96MW7 591 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 XYLT2Q9H1B5 865 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 ASAH2Q9NR71 780 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 ARIH1Q9Y4X5 557 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 ASB3Q9Y575 518 aa19.84■□□□□ 0.77
SHKBP1-202ENST00000593764 MUC6Q6W4X9 2439 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 CALUO43852 315 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 C4BPAP04003 597 aaKnown RBP19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 HAPLN1P10915 354 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 MYL4P12829 197 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 GJA1P17302 382 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 ATF6P18850 670 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 LMO2P25791 158 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 MYL6P60660 151 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 DLG4P78352 724 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 TSPY1Q01534 308 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 CCDC142Q17RM4 750 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 MGAT5BQ3V5L5 792 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 ZCWPW2Q504Y3 356 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 INTS6LQ5JSJ4 861 aaKnown RBP19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 TDRD10Q5VZ19 366 aaKnown RBP19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 SMYD4Q8IYR2 804 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 SHKBP1Q8TBC3 707 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 ERCC4Q92889 916 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 ZSWIM3Q96MP5 696 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 SEPT5Q99719 369 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 LPIN3Q9BQK8 851 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 ZNF334Q9HCZ1 680 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 ABI2Q9NYB9 513 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 WNT16Q9UBV4 365 aa19.83■□□□□ 0.77
SHKBP1-202ENST00000593764 GADD45BO75293 160 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 STAU1O95793 577 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 CFHP08603 1231 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 VCPP55072 806 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 MYL7Q01449 175 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 C1orf220Q5T0J3 134 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 IER5LQ5T953 404 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 CEP135Q66GS9 1140 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 FAM171BQ6P995 826 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 GAREM2Q75VX8 874 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 SUGP1Q8IWZ8 645 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 TMC2Q8TDI7 906 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 GSDMAQ96QA5 445 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 KXD1Q9BQD3 176 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 PLA2G2FQ9BZM2 168 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 SLC2A4RGQ9NR83 387 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 GTF3C4Q9UKN8 822 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 NME7Q9Y5B8 376 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 PCDHB5Q9Y5E4 795 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 PCDHA5Q9Y5H7 936 aa19.82■□□□□ 0.76
SHKBP1-202ENST00000593764 MYBPHLA2RUH7 354 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 KRBA1A5PL33 1030 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 MAPK13O15264 365 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 ATP2C2O75185 946 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 AKAP3O75969 853 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 VNN1O95497 513 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 NPR3P17342 541 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 WARSP23381 471 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 FCARP24071 287 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 NR2F2P24468 414 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 PCSK1P29120 753 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 AVPR2P30518 371 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 ATICP31939 592 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 AP3M2P53677 418 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 GPC5P78333 572 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 NFE2Q16621 373 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 WDR72Q3MJ13 1102 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 FAM78AQ5JUQ0 283 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 TANGO2Q6ICL3 276 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 GPR152Q8TDT2 470 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 ASB16Q96NS5 453 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 MMS19Q96T76 1030 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 PI4K2AQ9BTU6 479 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 FBXL21Q9UKT6 434 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 FRMD4BQ9Y2L6 1034 aa19.81■□□□□ 0.76
SHKBP1-202ENST00000593764 A0A1W2PRU2 124 aa19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 TACC1O75410 805 aa19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 ECI2O75521 394 aa19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 FAM163BP0C2L3 166 aa19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 PRCPP42785 496 aa19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 TRPC3Q13507 836 aa19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 TEAD2Q15562 447 aa19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 ZNF658Q5TYW1 1059 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 ELOA2Q8IYF1 753 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-202ENST00000593764 SIX5Q8N196 739 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms