RNA–Protein interactions for RNA: ENST00000593594.1

PDE4C-205, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-205ENST00000593594 CYB561D2O14569 222 aa20.14■□□□□ 0.81
PDE4C-205ENST00000593594 TRAK2O60296 914 aa20.14■□□□□ 0.81
PDE4C-205ENST00000593594 TAF12Q16514 161 aa20.14■□□□□ 0.81
PDE4C-205ENST00000593594 PKN3Q6P5Z2 889 aa20.14■□□□□ 0.81
PDE4C-205ENST00000593594 LRRTM3Q86VH5 581 aa20.14■□□□□ 0.81
PDE4C-205ENST00000593594 METTL23Q86XA0 190 aa20.14■□□□□ 0.81
PDE4C-205ENST00000593594 GIPC2Q8TF65 315 aa20.14■□□□□ 0.81
PDE4C-205ENST00000593594 GKN1Q9NS71 199 aa20.14■□□□□ 0.81
PDE4C-205ENST00000593594 SCN1AP35498 2009 aa20.14■□□□□ 0.81
PDE4C-205ENST00000593594 ANKRD63C9JTQ0 380 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 SLC26A4O43511 780 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 ACOT2P49753 483 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 PTPAQ15257 358 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 CMTM8Q8IZV2 173 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 THEM5Q8N1Q8 247 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 SPPL2BQ8TCT7 592 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 C2orf15Q8WU43 125 aaKnown RBP20.13■□□□□ 0.81
PDE4C-205ENST00000593594 CALML4Q96GE6 196 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 AK8Q96MA6 479 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 FIZ1Q96SL8 496 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 FAM83CQ9BQN1 747 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 PYM1Q9BRP8 204 aaKnown RBP20.13■□□□□ 0.81
PDE4C-205ENST00000593594 ASB7Q9H672 318 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 BLOC1S4Q9NUP1 217 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 ZMYM5Q9UJ78 669 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 C2CD2Q9Y426 696 aa20.13■□□□□ 0.81
PDE4C-205ENST00000593594 AXIN1O15169 862 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 HAPLN1P10915 354 aaPredicted RBP20.12■□□□□ 0.81
PDE4C-205ENST00000593594 NMT1P30419 496 aaKnown RBP20.12■□□□□ 0.81
PDE4C-205ENST00000593594 UBA7P41226 1012 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 PXNP49023 591 aaPredicted RBP20.12■□□□□ 0.81
PDE4C-205ENST00000593594 TAF6P49848 677 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 GTF2BQ00403 316 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 SMARCB1Q12824 385 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 MCM6Q14566 821 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 ST3GAL2Q16842 350 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 FSTL4Q6MZW2 842 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 TMEM150AQ86TG1 271 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 GAB3Q8WWW8 586 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 DDX1Q92499 740 aaKnown RBP20.12■□□□□ 0.81
PDE4C-205ENST00000593594 ARRDC1-AS1Q9H2J1 176 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 ZHX3Q9H4I2 956 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 HPS4Q9NQG7 708 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 CCL26Q9Y258 94 aa20.12■□□□□ 0.81
PDE4C-205ENST00000593594 CCDC163A0A0D9SF12 145 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 TISP43B9A030 160 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 KRT18P05783 430 aaKnown RBP20.11■□□□□ 0.81
PDE4C-205ENST00000593594 AVPR1AP37288 418 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 GRSF1Q12849 480 aaKnown RBP eCLIP20.11■□□□□ 0.81
PDE4C-205ENST00000593594 RUNX3Q13761 415 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 SF3A2Q15428 464 aaKnown RBP20.11■□□□□ 0.81
PDE4C-205ENST00000593594 AASDHQ4L235 1098 aaPredicted RBP20.11■□□□□ 0.81
PDE4C-205ENST00000593594 TMEM196Q5HYL7 178 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 WSCD1Q658N2 575 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 ADALQ6DHV7 355 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 IL31Q6EBC2 164 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 CACNA2D4Q7Z3S7 1137 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 MAB21L3Q8N8X9 362 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 CHFRQ96EP1 664 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 LOXL4Q96JB6 756 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 CCSER1Q9C0I3 900 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 EBF3Q9H4W6 596 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 DPP3Q9NY33 737 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 ABI2Q9NYB9 513 aaPredicted RBP20.11■□□□□ 0.81
PDE4C-205ENST00000593594 SPAG17Q6Q759 2223 aa20.11■□□□□ 0.81
PDE4C-205ENST00000593594 USP24Q9UPU5 2620 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 GREB1Q4ZG55 1949 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 OTOL1A6NHN0 477 aaPredicted RBP20.1■□□□□ 0.81
PDE4C-205ENST00000593594 TRDMT1O14717 391 aaKnown RBP20.1■□□□□ 0.81
PDE4C-205ENST00000593594 ATG13O75143 517 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 RPP40O75818 363 aaKnown RBP20.1■□□□□ 0.81
PDE4C-205ENST00000593594 F11P03951 625 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 HMGA1P17096 107 aaKnown RBP20.1■□□□□ 0.81
PDE4C-205ENST00000593594 KCNA4P22459 653 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 ABCD1P33897 745 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 RAP1GAPP47736 663 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 LIMK1P53667 647 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 NLRP12P59046 1061 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 CCDC6Q16204 474 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 ZC2HC1CQ53FD0 456 aaPredicted RBP20.1■□□□□ 0.81
PDE4C-205ENST00000593594 TRIM68Q6AZZ1 485 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 KBTBD6Q86V97 674 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 DCP1BQ8IZD4 617 aaKnown RBP20.1■□□□□ 0.81
PDE4C-205ENST00000593594 C12orf50Q8NA57 414 aaPredicted RBP20.1■□□□□ 0.81
PDE4C-205ENST00000593594 RAD54LQ92698 747 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 USP13Q92995 863 aaPredicted RBP20.1■□□□□ 0.81
PDE4C-205ENST00000593594 AGO2Q9UKV8 859 aaKnown RBP20.1■□□□□ 0.81
PDE4C-205ENST00000593594 SLC8A2Q9UPR5 921 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 STYXL1Q9Y6J8 313 aa20.1■□□□□ 0.81
PDE4C-205ENST00000593594 H3BQV1 296 aa20.09■□□□□ 0.81
PDE4C-205ENST00000593594 TBCAO75347 108 aaKnown RBP20.09■□□□□ 0.81
PDE4C-205ENST00000593594 EPN2O95208 641 aa20.09■□□□□ 0.81
PDE4C-205ENST00000593594 ZNF806P0C7X5 589 aa20.09■□□□□ 0.81
PDE4C-205ENST00000593594 CCDC192P0DO97 292 aa20.09■□□□□ 0.81
PDE4C-205ENST00000593594 PLCG1P19174 1290 aa20.09■□□□□ 0.81
PDE4C-205ENST00000593594 DDX6P26196 483 aaKnown RBP eCLIP20.09■□□□□ 0.81
PDE4C-205ENST00000593594 BFSP1Q12934 665 aa20.09■□□□□ 0.81
PDE4C-205ENST00000593594 TXNDC8Q6A555 127 aa20.09■□□□□ 0.81
PDE4C-205ENST00000593594 SLFN12LQ6IEE8 588 aa20.09■□□□□ 0.81
PDE4C-205ENST00000593594 CHAMP1Q96JM3 812 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms