RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 PSTPIP1O43586 416 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 MICAL2O94851 1124 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 GJB6O95452 261 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 CST5P28325 142 aaPredicted RBP12.65□□□□□ -0.38
NPC1-214ENST00000593280 HOXD10P28358 340 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 PLA2G4AP47712 749 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 CBX1P83916 185 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 KCNA10Q16322 511 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 XKR4Q5GH76 650 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 CYP4A22Q5TCH4 519 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 C9orf57Q5W0N0 161 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 DCUN1D2Q6PH85 259 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 MAATS1Q7Z4T9 603 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 SERINC5Q86VE9 423 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 SESTD1Q86VW0 696 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 SMG8Q8ND04 991 aaKnown RBP12.65□□□□□ -0.38
NPC1-214ENST00000593280 C3orf20Q8ND61 904 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 KLHDC9Q8NEP7 349 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 MCEEQ96PE7 176 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 NT5C1AQ9BXI3 368 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 SENP6Q9GZR1 1112 aaPredicted RBP12.65□□□□□ -0.38
NPC1-214ENST00000593280 PLEKHA4Q9H4M7 779 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 SRRDQ9UH36 339 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 KIAA1257Q9ULG3 409 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 SNX9Q9Y5X1 595 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 TCRBV5S1A1TA0A578 114 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 ESYT3A0FGR9 886 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 TMEM191CA6NGB0 347 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 O00370 1275 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 PHF2O75151 1096 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 RPS6KA5O75582 802 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 HMGCRP04035 888 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 CTSHP09668 335 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 HTRA3P83110 453 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 GPS2Q13227 327 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 CNGA2Q16280 664 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 PTPN20Q4JDL3 420 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 EMBQ6PCB8 327 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 SLC13A5Q86YT5 568 aaPredicted RBP12.64□□□□□ -0.39
NPC1-214ENST00000593280 RHOT1Q8IXI2 618 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 PCSK9Q8NBP7 692 aaKnown RBP12.64□□□□□ -0.39
NPC1-214ENST00000593280 CD99L2Q8TCZ2 262 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 CASKIN2Q8WXE0 1202 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 IFT81Q8WYA0 676 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 WNT8BQ93098 351 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 CFHR5Q9BXR6 569 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 SYNCQ9H7C4 482 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 VIPAS39Q9H9C1 493 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 ERVK-5Q9HDB9 667 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 CREBZFQ9NS37 354 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.64□□□□□ -0.39
NPC1-214ENST00000593280 AMACRQ9UHK6 382 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 MTUS1Q9ULD2 1270 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 USTQ9Y2C2 406 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 NR2E1Q9Y466 385 aa12.64□□□□□ -0.39
NPC1-214ENST00000593280 PNPLA4P41247 253 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 SSR1P43307 286 aaKnown RBP12.63□□□□□ -0.39
NPC1-214ENST00000593280 RPL7AP62424 266 aaKnown RBP12.63□□□□□ -0.39
NPC1-214ENST00000593280 CUL1Q13616 776 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 STILQ15468 1287 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 FBXO47Q5MNV8 452 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 PPP1R15BQ5SWA1 713 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 CCSAPQ6IQ19 270 aaPredicted RBP12.63□□□□□ -0.39
NPC1-214ENST00000593280 SND1Q7KZF4 910 aaKnown RBP eCLIP12.63□□□□□ -0.394e-7■■■■□ 26.2
NPC1-214ENST00000593280 DPH6Q7L8W6 267 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 RPAINQ86UA6 219 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 HACE1Q8IYU2 909 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 CAVIN3Q969G5 261 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 DDX27Q96GQ7 796 aaKnown RBP12.63□□□□□ -0.39
NPC1-214ENST00000593280 GDAP1L1Q96MZ0 367 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 MRPL45Q9BRJ2 306 aaKnown RBP12.63□□□□□ -0.39
NPC1-214ENST00000593280 RNF19AQ9NV58 838 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 WDR35Q9P2L0 1181 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 CYTH4Q9UIA0 394 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 ST3GAL5Q9UNP4 418 aa12.63□□□□□ -0.39
NPC1-214ENST00000593280 GOLGA8SH3BPF8 625 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 PIRO00625 290 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 TTI1O43156 1089 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 TRPA1O75762 1119 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 CHRNA1P02708 482 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 CYP3A5P20815 502 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 CHRNA3P32297 505 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 THPOP40225 353 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 CARSP49589 748 aaKnown RBP12.62□□□□□ -0.39
NPC1-214ENST00000593280 GSCP56915 257 aaPredicted RBP12.62□□□□□ -0.39
NPC1-214ENST00000593280 PSMC1P62191 440 aaKnown RBP12.62□□□□□ -0.39
NPC1-214ENST00000593280 DR1Q01658 176 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 MGAT3Q09327 533 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 NFX1Q12986 1120 aaKnown RBP12.62□□□□□ -0.39
NPC1-214ENST00000593280 PDCLQ13371 301 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 NNTQ13423 1086 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 DHX34Q14147 1143 aaKnown RBP12.62□□□□□ -0.39
NPC1-214ENST00000593280 SMC1AQ14683 1233 aaKnown RBP12.62□□□□□ -0.39
NPC1-214ENST00000593280 PTGISQ16647 500 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 SV2CQ496J9 727 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 DAB2IPQ5VWQ8 1189 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 LCLAT1Q6UWP7 414 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 KATNAL2Q8IYT4 538 aa12.62□□□□□ -0.39
NPC1-214ENST00000593280 PRELID2Q8N945 189 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms