RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 FOXD4L3Q6VB84 417 aaPredicted RBP17.39■□□□□ 0.37
CIRBP-241ENST00000593048 ARID3BQ8IVW6 561 aaPredicted RBP17.39■□□□□ 0.37
CIRBP-241ENST00000593048 GPD1LQ8N335 351 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 IQUBQ8NA54 791 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 GIPC2Q8TF65 315 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 FAM3CQ92520 227 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 CLDN23Q96B33 292 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 DHX58Q96C10 678 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 BORCS6Q96GS4 357 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 HINFPQ9BQA5 517 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 FGFBP2Q9BYJ0 223 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 CUEDC2Q9H467 287 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 TRPV5Q9NQA5 729 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 FBXO4Q9UKT5 387 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 PIAS3Q9Y6X2 628 aa17.39■□□□□ 0.37
CIRBP-241ENST00000593048 GOLGA6L22H0YM25 854 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 KIAA0391O15091 583 aaKnown RBP17.38■□□□□ 0.37
CIRBP-241ENST00000593048 CUTAO60888 179 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 YEATS4O95619 227 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 CDC25CP30307 473 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 RPS9P46781 194 aaKnown RBP17.38■□□□□ 0.37
CIRBP-241ENST00000593048 WNT7BP56706 349 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 ASIC1P78348 528 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 RBP5P82980 135 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 BFSP1Q12934 665 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 STXBP5Q5T5C0 1151 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 GAREM2Q75VX8 874 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 LRRTM3Q86VH5 581 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 C1orf127Q8N9H9 656 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 SPRYD3Q8NCJ5 442 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 ANKRD36BP1Q96IX9 119 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 PDE11AQ9HCR9 933 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 KBTBD4Q9NVX7 518 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 ITGA11Q9UKX5 1188 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 PCDHB5Q9Y5E4 795 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 COL4A3Q01955 1670 aa17.38■□□□□ 0.37
CIRBP-241ENST00000593048 KINO60870 393 aaKnown RBP17.37■□□□□ 0.37
CIRBP-241ENST00000593048 HAPLN1P10915 354 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-241ENST00000593048 KPNA1P52294 538 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-241ENST00000593048 MYL7Q01449 175 aa17.37■□□□□ 0.37
CIRBP-241ENST00000593048 ZNF528Q3MIS6 628 aa17.37■□□□□ 0.37
CIRBP-241ENST00000593048 MAML2Q8IZL2 1156 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-241ENST00000593048 PDCL2Q8N4E4 241 aa17.37■□□□□ 0.37
CIRBP-241ENST00000593048 LRRC52Q8N7C0 313 aa17.37■□□□□ 0.37
CIRBP-241ENST00000593048 HPS3Q969F9 1004 aa17.37■□□□□ 0.37
CIRBP-241ENST00000593048 TRIM9Q9C026 710 aa17.37■□□□□ 0.37
CIRBP-241ENST00000593048 SNX9Q9Y5X1 595 aa17.37■□□□□ 0.37
CIRBP-241ENST00000593048 CACNA1AO00555 2505 aa17.37■□□□□ 0.37
CIRBP-241ENST00000593048 EP300Q09472 2414 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-241ENST00000593048 ZNF233A6NK53 670 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 CHADO15335 359 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 PRPF40AO75400 957 aaKnown RBP17.36■□□□□ 0.37
CIRBP-241ENST00000593048 TNNC2P02585 160 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 ATF6P18850 670 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 CCNE1P24864 410 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 CYP4F8P98187 520 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 SURF1Q15526 300 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 E2F4Q16254 413 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 NFE2Q16621 373 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-241ENST00000593048 TMEM86AQ8N2M4 240 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 ATRIPQ8WXE1 791 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 RSPRY1Q96DX4 576 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 ACBD6Q9BR61 282 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 PI4K2AQ9BTU6 479 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 MTMR12Q9C0I1 747 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 TASP1Q9H6P5 420 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 LMAN1LQ9HAT1 526 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 DDX43Q9NXZ2 648 aaKnown RBP17.36■□□□□ 0.37
CIRBP-241ENST00000593048 L1RE1Q9UN81 338 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 ATP6V1DQ9Y5K8 247 aa17.36■□□□□ 0.37
CIRBP-241ENST00000593048 EIF3DO15371 548 aaKnown RBP eCLIP17.35■□□□□ 0.37
CIRBP-241ENST00000593048 POLR2DO15514 142 aaKnown RBP17.35■□□□□ 0.37
CIRBP-241ENST00000593048 ZSCAN22P10073 491 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-241ENST00000593048 ACAT1P24752 427 aaKnown RBP17.35■□□□□ 0.37
CIRBP-241ENST00000593048 ME1P48163 572 aa17.35■□□□□ 0.37
CIRBP-241ENST00000593048 FCHO2Q0JRZ9 810 aa17.35■□□□□ 0.37
CIRBP-241ENST00000593048 MYO1EQ12965 1108 aa17.35■□□□□ 0.37
CIRBP-241ENST00000593048 MTAPQ13126 283 aa17.35■□□□□ 0.37
CIRBP-241ENST00000593048 ARHGAP29Q52LW3 1261 aa17.35■□□□□ 0.37
CIRBP-241ENST00000593048 LMBRD2Q68DH5 695 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-241ENST00000593048 SHC4Q6S5L8 630 aa17.35■□□□□ 0.37
CIRBP-241ENST00000593048 GLIS3Q8NEA6 775 aa17.35■□□□□ 0.37
CIRBP-241ENST00000593048 FAM84AQ96KN4 292 aa17.35■□□□□ 0.37
CIRBP-241ENST00000593048 C8orf33Q9H7E9 229 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-241ENST00000593048 KIAA1586Q9HCI6 787 aa17.35■□□□□ 0.37
CIRBP-241ENST00000593048 FAM13BQ9NYF5 915 aa17.35■□□□□ 0.37
CIRBP-241ENST00000593048 MAGED2Q9UNF1 606 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-241ENST00000593048 NCANO14594 1321 aa17.35■□□□□ 0.37
CIRBP-241ENST00000593048 SCN1AP35498 2009 aa17.35■□□□□ 0.37
CIRBP-241ENST00000593048 SHISA7A6NL88 538 aa17.34■□□□□ 0.37
CIRBP-241ENST00000593048 ZNF292O60281 2723 aa17.34■□□□□ 0.37
CIRBP-241ENST00000593048 F13A1P00488 732 aa17.34■□□□□ 0.37
CIRBP-241ENST00000593048 LHX1P48742 406 aa17.34■□□□□ 0.37
CIRBP-241ENST00000593048 FZD5Q13467 585 aa17.34■□□□□ 0.37
CIRBP-241ENST00000593048 PPP2R5DQ14738 602 aa17.34■□□□□ 0.37
CIRBP-241ENST00000593048 DUOXA2Q1HG44 320 aa17.34■□□□□ 0.37
CIRBP-241ENST00000593048 SKOR2Q2VWA4 1001 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-241ENST00000593048 MIA3Q5JRA6 1907 aa17.34■□□□□ 0.37
CIRBP-241ENST00000593048 FAM26FQ5R3K3 315 aa17.34■□□□□ 0.37
CIRBP-241ENST00000593048 C1orf228Q6PIY5 440 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms