RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CD207Q9UJ71 328 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 A8MXQ7 604 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 PRRG1O14668 218 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 HCRTO43612 131 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 CAVIN2O95810 425 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 PDGFRBP09619 1106 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 LMO2P25791 158 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 TFF2Q03403 129 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 ADCY1Q08828 1119 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 CLUL1Q15846 466 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 VWA3BQ502W6 1294 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 INTS6LQ5JSJ4 861 aaKnown RBP15.96■□□□□ 0.15
DDX39A-221ENST00000593026 SYCE2Q6PIF2 218 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 CCDC149Q6ZUS6 474 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 DHX40Q8IX18 779 aaKnown RBP15.96■□□□□ 0.15
DDX39A-221ENST00000593026 ANKRD20A12PQ8NF67 263 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 SLC7A14Q8TBB6 771 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 ATXN2LQ8WWM7 1075 aaKnown RBP15.96■□□□□ 0.15
DDX39A-221ENST00000593026 FAXDC2Q96IV6 333 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 SYT15Q9BQS2 421 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 BCO2Q9BYV7 579 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 SDCBP2Q9H190 292 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 NDST4Q9H3R1 872 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 CYP3A43Q9HB55 503 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 CDH9Q9ULB4 789 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 MAFFQ9ULX9 164 aa15.96■□□□□ 0.15
DDX39A-221ENST00000593026 A0A0C4DFX4 3053 aa15.96■□□□□ 0.14
DDX39A-221ENST00000593026 MTMR11A4FU01 709 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 BECN2A8MW95 431 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 PES1O00541 588 aaKnown RBP15.95■□□□□ 0.14
DDX39A-221ENST00000593026 DLL1O00548 723 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 ZMYND10O75800 440 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 C8AP07357 584 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 TPM2P07951 284 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 WEE2P0C1S8 567 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 PSMC1P62191 440 aaKnown RBP15.95■□□□□ 0.14
DDX39A-221ENST00000593026 SMARCB1Q12824 385 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 LRMPQ12912 555 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 KRT31Q15323 416 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 AAK1Q2M2I8 961 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 LEXMQ3ZCV2 418 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 MIIPQ5JXC2 388 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 PPM1LQ5SGD2 360 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 RARS2Q5T160 578 aaKnown RBP15.95■□□□□ 0.14
DDX39A-221ENST00000593026 LRRTM3Q86VH5 581 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 C12orf76Q8N812 135 aaPredicted RBP15.95■□□□□ 0.14
DDX39A-221ENST00000593026 SMRP1Q8NCR6 262 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 EHBP1Q8NDI1 1231 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 LMO3Q8TAP4 145 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 TATDN2Q93075 761 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 NT5C1BQ96P26 610 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 APOL5Q9BWW9 433 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 INTS2Q9H0H0 1204 aaKnown RBP15.95■□□□□ 0.14
DDX39A-221ENST00000593026 CYP4F11Q9HBI6 524 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 ZDHHC7Q9NXF8 308 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 TAB2Q9NYJ8 693 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 GCNT4Q9P109 453 aa15.95■□□□□ 0.14
DDX39A-221ENST00000593026 MTCL1Q9Y4B5 1905 aaKnown RBP15.95■□□□□ 0.14
DDX39A-221ENST00000593026 BRWD1Q9NSI6 2320 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 GTPBP10A4D1E9 387 aaKnown RBP15.94■□□□□ 0.14
DDX39A-221ENST00000593026 RFPL2O75678 378 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 SEC24AO95486 1093 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 ZNF18P17022 549 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 CD58P19256 250 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 CDK11BP21127 795 aaKnown RBP15.94■□□□□ 0.14
DDX39A-221ENST00000593026 ITIH3Q06033 890 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 CUL2Q13617 745 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 IQCB1Q15051 598 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 MAPRE1Q15691 268 aaKnown RBP15.94■□□□□ 0.14
DDX39A-221ENST00000593026 NFE2Q16621 373 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-221ENST00000593026 UVSSAQ2YD98 709 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 TMC5Q6UXY8 1006 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 GBP6Q6ZN66 633 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 TCEAL8Q8IYN2 117 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 ATAD1Q8NBU5 361 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 SPPL2BQ8TCT7 592 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 C2orf15Q8WU43 125 aaKnown RBP15.94■□□□□ 0.14
DDX39A-221ENST00000593026 PKMYT1Q99640 499 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 CRACR2AQ9BSW2 395 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 S1PR5Q9H228 398 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 HSD3B7Q9H2F3 369 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 CBX8Q9HC52 389 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 TMLHEQ9NVH6 421 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 ABI2Q9NYB9 513 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-221ENST00000593026 GTF3C4Q9UKN8 822 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 NME7Q9Y5B8 376 aa15.94■□□□□ 0.14
DDX39A-221ENST00000593026 CCDC195A0A1B0GUA6 201 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 ATP2C2O75185 946 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 VNN2O95498 520 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 HNRNPA1P09651 372 aaKnown RBP eCLIP15.93■□□□□ 0.14
DDX39A-221ENST00000593026 TBXAS1P24557 533 aaPredicted RBP15.93■□□□□ 0.14
DDX39A-221ENST00000593026 HOXA9P31269 272 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 CDR1P51861 262 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 NDST1P52848 882 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 INCA1Q0VD86 236 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 DUSP4Q13115 394 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 SMAD4Q13485 552 aaKnown RBP15.93■□□□□ 0.14
DDX39A-221ENST00000593026 EXOC3L4Q17RC7 722 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 CES5AQ6NT32 575 aa15.93■□□□□ 0.14
DDX39A-221ENST00000593026 LRSAM1Q6UWE0 723 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms