RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 SGSM1Q2NKQ1 1148 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 SLC39A12Q504Y0 691 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 GRASPQ7Z6J2 395 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-218ENST00000592632 ADGRF2Q8IZF7 708 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 TTC9BQ8N6N2 239 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 SYAP1Q96A49 352 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-218ENST00000592632 CEP63Q96MT8 703 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 MMS19Q96T76 1030 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 PKMYT1Q99640 499 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 MRPL45Q9BRJ2 306 aaKnown RBP13.93□□□□□ -0.18
DDX39A-218ENST00000592632 HCFC1R1Q9NWW0 138 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 DDX43Q9NXZ2 648 aaKnown RBP13.93□□□□□ -0.18
DDX39A-218ENST00000592632 DNMT3BQ9UBC3 853 aaKnown RBP13.93□□□□□ -0.18
DDX39A-218ENST00000592632 NXF1Q9UBU9 619 aaKnown RBP13.93□□□□□ -0.18
DDX39A-218ENST00000592632 CTNND2Q9UQB3 1225 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 USTQ9Y2C2 406 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 NME7Q9Y5B8 376 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 INSL5Q9Y5Q6 135 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 DENND4AQ7Z401 1863 aa13.93□□□□□ -0.18
DDX39A-218ENST00000592632 C2CD4DB7Z1M9 353 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 GOLGA6L22H0YM25 854 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 N4BP1O75113 896 aaKnown RBP13.92□□□□□ -0.18
DDX39A-218ENST00000592632 ATP2C2O75185 946 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 XYLBO75191 536 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 LRRN2O75325 713 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 ASS1P00966 412 aaKnown RBP13.92□□□□□ -0.18
DDX39A-218ENST00000592632 ALADP13716 330 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 WARSP23381 471 aaKnown RBP13.92□□□□□ -0.18
DDX39A-218ENST00000592632 ACAT1P24752 427 aaKnown RBP13.92□□□□□ -0.18
DDX39A-218ENST00000592632 GTF2H1P32780 548 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 GNL1P36915 607 aaPredicted RBP13.92□□□□□ -0.18
DDX39A-218ENST00000592632 CDH8P55286 799 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 MYL7Q01449 175 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 PAK1Q13153 545 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 FAM171BQ6P995 826 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 FRMD5Q7Z6J6 570 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 DCP1BQ8IZD4 617 aaKnown RBP13.92□□□□□ -0.18
DDX39A-218ENST00000592632 MLKLQ8NB16 471 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 TAS1R2Q8TE23 839 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 TMEM8AQ9HCN3 771 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 CEP72Q9P209 647 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 ARMCX3Q9UH62 379 aaPredicted RBP13.92□□□□□ -0.18
DDX39A-218ENST00000592632 GTF3C4Q9UKN8 822 aa13.92□□□□□ -0.18
DDX39A-218ENST00000592632 CLUHO75153 1309 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 BICDL2A1A5D9 508 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 MYBPHLA2RUH7 354 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 PRR33A8MZF0 331 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 LRG1P02750 347 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 PDGFRBP09619 1106 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 PTPN2P17706 415 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 PCSK1P29120 753 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 TNNC1P63316 161 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 TSPY1Q01534 308 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 TWF1Q12792 350 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 SMARCB1Q12824 385 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 CCDC142Q17RM4 750 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 ZNF699Q32M78 642 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 ZNF667Q5HYK9 610 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 INTS6LQ5JSJ4 861 aaKnown RBP13.91□□□□□ -0.18
DDX39A-218ENST00000592632 SPOPLQ6IQ16 392 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 OTOP3Q7RTS5 596 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 RNF135Q8IUD6 432 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 ZDHHC14Q8IZN3 488 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 TAF4BQ92750 862 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 SEMA4DQ92854 862 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 MYADMQ96S97 322 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 PI4K2AQ9BTU6 479 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 SRRTQ9BXP5 876 aaKnown RBP13.91□□□□□ -0.18
DDX39A-218ENST00000592632 SDCBP2Q9H190 292 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 DNAJC25Q9H1X3 360 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 SMYD3Q9H7B4 428 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 MMRN2Q9H8L6 949 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 APOBEC3GQ9HC16 384 aaKnown RBP13.91□□□□□ -0.18
DDX39A-218ENST00000592632 HSFX1Q9UBD0 423 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 RWDD2AQ9UIY3 292 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 NR2E1Q9Y466 385 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 ARIH1Q9Y4X5 557 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-218ENST00000592632 YIPF1Q9Y548 306 aa13.91□□□□□ -0.18
DDX39A-218ENST00000592632 DCXO43602 365 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 SOAT2O75908 522 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 HAPLN1P10915 354 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-218ENST00000592632 FSHRP23945 695 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 TUFMP49411 452 aaKnown RBP13.9□□□□□ -0.18
DDX39A-218ENST00000592632 NLRP12P59046 1061 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 NFE2Q16621 373 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-218ENST00000592632 KRT39Q6A163 491 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 POTEHQ6S545 545 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 RBM43Q6ZSC3 357 aaKnown RBP13.9□□□□□ -0.18
DDX39A-218ENST00000592632 HS6ST3Q8IZP7 471 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 OR6B3Q8NGW1 331 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 ITFG1Q8TB96 612 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 C2orf15Q8WU43 125 aaKnown RBP13.9□□□□□ -0.18
DDX39A-218ENST00000592632 SLC35C1Q96A29 364 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 LPIN3Q9BQK8 851 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 SNX25Q9H3E2 840 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 METTL14Q9HCE5 456 aaKnown RBP13.9□□□□□ -0.18
DDX39A-218ENST00000592632 CRTAC1Q9NQ79 661 aa13.9□□□□□ -0.18
DDX39A-218ENST00000592632 AVENQ9NQS1 362 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-218ENST00000592632 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.9□□□□□ -0.183e-6■■■■■ 28.8
DDX39A-218ENST00000592632 LIMD1Q9UGP4 676 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms