RNA–Protein interactions for RNA: ENST00000592107.5

AP000547.3-202, humanhuman

TSL 1 (best) BASIC

Gene AP000547.3, Length 1,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-202ENST00000592107 USP15Q9Y4E8 981 aaPredicted RBP28.3■■■□□ 2.12
AP000547.3-202ENST00000592107 SPTBN5Q9NRC6 3674 aaKnown RBP28.3■■■□□ 2.12
AP000547.3-202ENST00000592107 GRXCR2A6NFK2 248 aa28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 PRRG1O14668 218 aa28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 RFPL2O75678 378 aa28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 AFPP02771 609 aaKnown RBP28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 ACAT1P24752 427 aaKnown RBP28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 HOXA9P31269 272 aa28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 MTIF2P46199 727 aaKnown RBP28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 CETN1Q12798 172 aa28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 KCNH2Q12809 1159 aa28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 UVSSAQ2YD98 709 aa28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 WDR44Q5JSH3 913 aa28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 INTS6LQ5JSJ4 861 aaKnown RBP28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 TCEAL8Q8IYN2 117 aa28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 OR6B3Q8NGW1 331 aa28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 PGLYRP2Q96PD5 576 aa28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 NIF3L1Q9GZT8 377 aa28.29■■■□□ 2.12
AP000547.3-202ENST00000592107 DENND4AQ7Z401 1863 aa28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 CCDC195A0A1B0GUA6 201 aa28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 MTMR11A4FU01 709 aa28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 PMM2O15305 246 aa28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 P4HA2O15460 535 aa28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 HNRNPA1P09651 372 aaKnown RBP eCLIP28.28■■■□□ 2.129e-8■□□□□ 8.7
AP000547.3-202ENST00000592107 ASPAP45381 313 aa28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 SMARCB1Q12824 385 aa28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 SYT15Q9BQS2 421 aa28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 NAT10Q9H0A0 1025 aaKnown RBP28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 APOBEC3GQ9HC16 384 aaKnown RBP28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 CDH9Q9ULB4 789 aa28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 XIRP2A4UGR9 3374 aa28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 TCF20Q9UGU0 1960 aaKnown RBP28.28■■■□□ 2.12
AP000547.3-202ENST00000592107 SYCE3A1L190 88 aa28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 HCRTO43612 131 aa28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 SEC24AO95486 1093 aa28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 GNL1P36915 607 aaPredicted RBP28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 MTHFRP42898 656 aa28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 RAP1GAPP47736 663 aa28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 NFKBIBQ15653 356 aa28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 CYP26C1Q6V0L0 522 aa28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 GPR149Q86SP6 731 aa28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 C2orf15Q8WU43 125 aaKnown RBP28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 SUSD6Q92537 303 aa28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 RIPOR3Q96MK2 946 aa28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 BCO2Q9BYV7 579 aa28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 INSL5Q9Y5Q6 135 aa28.27■■■□□ 2.12
AP000547.3-202ENST00000592107 LRRN2O75325 713 aa28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 PAPLNO95428 1278 aa28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 IL9P15248 144 aa28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 MYL5Q02045 173 aa28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 SMAD2Q15796 467 aaKnown RBP28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 NFE2Q16621 373 aaPredicted RBP28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 ANO6Q4KMQ2 910 aa28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 TJAP1Q5JTD0 557 aa28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 LRRTM3Q86VH5 581 aa28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 FAXDC2Q96IV6 333 aa28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 NECTIN4Q96NY8 510 aa28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 RHOBTB2Q9BYZ6 727 aa28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 PRKD2Q9BZL6 878 aa28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 SDCBP2Q9H190 292 aa28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 SAMSN1Q9NSI8 373 aaKnown RBP28.26■■■□□ 2.11
AP000547.3-202ENST00000592107 A8MXQ7 604 aa28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 VNN2O95498 520 aa28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 LRG1P02750 347 aa28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 LMO2P25791 158 aa28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 CDH8P55286 799 aa28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 CBX2Q14781 532 aaPredicted RBP28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 HSP90AA4PQ58FG1 418 aa28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 ATAT1Q5SQI0 421 aa28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 SPPL2BQ8TCT7 592 aa28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 SMG7Q92540 1137 aaKnown RBP28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 ZNF707Q96C28 371 aaPredicted RBP28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 CYP3A43Q9HB55 503 aa28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 PIDD1Q9HB75 910 aa28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 HSFX1Q9UBD0 423 aa28.25■■■□□ 2.11
AP000547.3-202ENST00000592107 PTPRDP23468 1912 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 KCNJ18B7U540 433 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 XYLBO75191 536 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 POU2F2P09086 479 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 PDGFRBP09619 1106 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 WEE2P0C1S8 567 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 PSMC1P62191 440 aaKnown RBP28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 KCNJ12Q14500 433 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 MAN2A1Q16706 1144 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 ATAD1Q8NBU5 361 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 PKMYT1Q99640 499 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 FUCA2Q9BTY2 467 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 ABI2Q9NYB9 513 aaPredicted RBP28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 CDH22Q9UJ99 828 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 YIPF1Q9Y548 306 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 NME7Q9Y5B8 376 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 PCDHB5Q9Y5E4 795 aa28.24■■■□□ 2.11
AP000547.3-202ENST00000592107 CCL16O15467 120 aa28.23■■■□□ 2.11
AP000547.3-202ENST00000592107 BMP1P13497 986 aa28.23■■■□□ 2.11
AP000547.3-202ENST00000592107 EEF1GP26641 437 aaKnown RBP28.23■■■□□ 2.11
AP000547.3-202ENST00000592107 DUSP4Q13115 394 aa28.23■■■□□ 2.11
AP000547.3-202ENST00000592107 PLD1Q13393 1074 aa28.23■■■□□ 2.11
AP000547.3-202ENST00000592107 MAPRE1Q15691 268 aaKnown RBP28.23■■■□□ 2.11
AP000547.3-202ENST00000592107 TMLHEQ9NVH6 421 aa28.23■■■□□ 2.11
AP000547.3-202ENST00000592107 GTF3C4Q9UKN8 822 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms