RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SRFP11831 508 aa29.23■■■□□ 2.27
SMAD4-213ENST00000591914 LHX1P48742 406 aa29.23■■■□□ 2.27
SMAD4-213ENST00000591914 CASP4P49662 377 aa29.23■■■□□ 2.27
SMAD4-213ENST00000591914 MYL7Q01449 175 aa29.23■■■□□ 2.27
SMAD4-213ENST00000591914 NFIL3Q16649 462 aa29.23■■■□□ 2.27
SMAD4-213ENST00000591914 OSTM1Q86WC4 334 aa29.23■■■□□ 2.27
SMAD4-213ENST00000591914 TMC8Q8IU68 726 aa29.23■■■□□ 2.27
SMAD4-213ENST00000591914 SUGP1Q8IWZ8 645 aaKnown RBP29.23■■■□□ 2.27
SMAD4-213ENST00000591914 MCRS1Q96EZ8 462 aa29.23■■■□□ 2.27
SMAD4-213ENST00000591914 RPP25Q9BUL9 199 aaKnown RBP29.23■■■□□ 2.27
SMAD4-213ENST00000591914 TMLHEQ9NVH6 421 aa29.23■■■□□ 2.27
SMAD4-213ENST00000591914 LRRIQ3A6PVS8 624 aaPredicted RBP29.22■■■□□ 2.27
SMAD4-213ENST00000591914 MOSPD3O75425 235 aa29.22■■■□□ 2.27
SMAD4-213ENST00000591914 KBTBD7Q8WVZ9 684 aa29.22■■■□□ 2.27
SMAD4-213ENST00000591914 PSMG2Q969U7 264 aa29.22■■■□□ 2.27
SMAD4-213ENST00000591914 TIGD1Q96MW7 591 aa29.22■■■□□ 2.27
SMAD4-213ENST00000591914 PKMYT1Q99640 499 aa29.22■■■□□ 2.27
SMAD4-213ENST00000591914 SEPT5Q99719 369 aaPredicted RBP29.22■■■□□ 2.27
SMAD4-213ENST00000591914 STAU1O95793 577 aaKnown RBP29.21■■■□□ 2.27
SMAD4-213ENST00000591914 MYL4P12829 197 aa29.21■■■□□ 2.27
SMAD4-213ENST00000591914 CDR1P51861 262 aa29.21■■■□□ 2.27
SMAD4-213ENST00000591914 AP3M2P53677 418 aa29.21■■■□□ 2.27
SMAD4-213ENST00000591914 NFE2Q16621 373 aaPredicted RBP29.21■■■□□ 2.27
SMAD4-213ENST00000591914 MGAT5BQ3V5L5 792 aa29.21■■■□□ 2.27
SMAD4-213ENST00000591914 INTS6LQ5JSJ4 861 aaKnown RBP29.21■■■□□ 2.27
SMAD4-213ENST00000591914 SPATA20Q8TB22 786 aa29.21■■■□□ 2.27
SMAD4-213ENST00000591914 RMND1Q9NWS8 449 aa29.21■■■□□ 2.27
SMAD4-213ENST00000591914 ABI2Q9NYB9 513 aaPredicted RBP29.21■■■□□ 2.27
SMAD4-213ENST00000591914 PCDHB5Q9Y5E4 795 aa29.21■■■□□ 2.27
SMAD4-213ENST00000591914 HAPLN1P10915 354 aaPredicted RBP29.2■■■□□ 2.26
SMAD4-213ENST00000591914 ATF6P18850 670 aa29.2■■■□□ 2.26
SMAD4-213ENST00000591914 ACAT1P24752 427 aaKnown RBP29.2■■■□□ 2.26
SMAD4-213ENST00000591914 PCSK1P29120 753 aa29.2■■■□□ 2.26
SMAD4-213ENST00000591914 ZCWPW2Q504Y3 356 aa29.2■■■□□ 2.26
SMAD4-213ENST00000591914 DNAJB7Q7Z6W7 309 aaPredicted RBP29.2■■■□□ 2.26
SMAD4-213ENST00000591914 TMC2Q8TDI7 906 aa29.2■■■□□ 2.26
SMAD4-213ENST00000591914 GSDMAQ96QA5 445 aa29.2■■■□□ 2.26
SMAD4-213ENST00000591914 XYLT2Q9H1B5 865 aa29.2■■■□□ 2.26
SMAD4-213ENST00000591914 SLC2A4RGQ9NR83 387 aa29.2■■■□□ 2.26
SMAD4-213ENST00000591914 WNT16Q9UBV4 365 aa29.2■■■□□ 2.26
SMAD4-213ENST00000591914 FRMD4BQ9Y2L6 1034 aa29.2■■■□□ 2.26
SMAD4-213ENST00000591914 KMT2EQ8IZD2 1858 aa29.2■■■□□ 2.26
SMAD4-213ENST00000591914 WDFY4Q6ZS81 3184 aa29.2■■■□□ 2.26
SMAD4-213ENST00000591914 MAPK13O15264 365 aa29.19■■■□□ 2.26
SMAD4-213ENST00000591914 CFHP08603 1231 aa29.19■■■□□ 2.26
SMAD4-213ENST00000591914 NR2F2P24468 414 aa29.19■■■□□ 2.26
SMAD4-213ENST00000591914 MYL6P60660 151 aa29.19■■■□□ 2.26
SMAD4-213ENST00000591914 TDRD10Q5VZ19 366 aaKnown RBP29.19■■■□□ 2.26
SMAD4-213ENST00000591914 CEP135Q66GS9 1140 aa29.19■■■□□ 2.26
SMAD4-213ENST00000591914 ITIH5Q86UX2 942 aa29.19■■■□□ 2.26
SMAD4-213ENST00000591914 SMYD4Q8IYR2 804 aaPredicted RBP29.19■■■□□ 2.26
SMAD4-213ENST00000591914 SHKBP1Q8TBC3 707 aa29.19■■■□□ 2.26
SMAD4-213ENST00000591914 KXD1Q9BQD3 176 aa29.19■■■□□ 2.26
SMAD4-213ENST00000591914 ABCB6Q9NP58 842 aa29.19■■■□□ 2.26
SMAD4-213ENST00000591914 FBXL21Q9UKT6 434 aa29.19■■■□□ 2.26
SMAD4-213ENST00000591914 HCRTO43612 131 aa29.18■■■□□ 2.26
SMAD4-213ENST00000591914 ECI2O75521 394 aa29.18■■■□□ 2.26
SMAD4-213ENST00000591914 C4BPAP04003 597 aaKnown RBP29.18■■■□□ 2.26
SMAD4-213ENST00000591914 WARSP23381 471 aaKnown RBP29.18■■■□□ 2.26
SMAD4-213ENST00000591914 ATICP31939 592 aa29.18■■■□□ 2.26
SMAD4-213ENST00000591914 DLG4P78352 724 aa29.18■■■□□ 2.26
SMAD4-213ENST00000591914 TRPC3Q13507 836 aa29.18■■■□□ 2.26
SMAD4-213ENST00000591914 MMS19Q96T76 1030 aa29.18■■■□□ 2.26
SMAD4-213ENST00000591914 LPIN3Q9BQK8 851 aa29.18■■■□□ 2.26
SMAD4-213ENST00000591914 KCNH6Q9H252 994 aa29.18■■■□□ 2.26
SMAD4-213ENST00000591914 ZNF334Q9HCZ1 680 aaPredicted RBP29.18■■■□□ 2.26
SMAD4-213ENST00000591914 GTF3C4Q9UKN8 822 aa29.18■■■□□ 2.26
SMAD4-213ENST00000591914 PHACTR2O75167 634 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 SMC2O95347 1197 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 FAM163BP0C2L3 166 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 GJA1P17302 382 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 FCARP24071 287 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 VCPP55072 806 aaKnown RBP29.17■■■□□ 2.26
SMAD4-213ENST00000591914 VEPH1Q14D04 833 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 WDR72Q3MJ13 1102 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 FAM78AQ5JUQ0 283 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 ELOA2Q8IYF1 753 aaPredicted RBP29.17■■■□□ 2.26
SMAD4-213ENST00000591914 GPR152Q8TDT2 470 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 SYAP1Q96A49 352 aaPredicted RBP29.17■■■□□ 2.26
SMAD4-213ENST00000591914 ZSWIM3Q96MP5 696 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 ASB16Q96NS5 453 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 VRTNQ9H8Y1 702 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 HOOK1Q9UJC3 728 aaKnown RBP29.17■■■□□ 2.26
SMAD4-213ENST00000591914 PCDHA5Q9Y5H7 936 aa29.17■■■□□ 2.26
SMAD4-213ENST00000591914 IKBKBO14920 756 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 TACC1O75410 805 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 AKAP3O75969 853 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 FGF19O95750 216 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 LMO2P25791 158 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 RPL13P26373 211 aaKnown RBP29.16■■■□□ 2.26
SMAD4-213ENST00000591914 BIRC3Q13489 604 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 TEAD2Q15562 447 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 CCDC142Q17RM4 750 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 COBLL1Q53SF7 1204 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 ZNF658Q5TYW1 1059 aaPredicted RBP29.16■■■□□ 2.26
SMAD4-213ENST00000591914 FAM171BQ6P995 826 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 GAREM2Q75VX8 874 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 SIX5Q8N196 739 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 ELSPBP1Q96BH3 223 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 PI4K2AQ9BTU6 479 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms