RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 MAPK13O15264 365 aa19.56■□□□□ 0.72
DDX39A-212ENST00000590260 STAU1O95793 577 aaKnown RBP19.56■□□□□ 0.72
DDX39A-212ENST00000590260 PDGFBP01127 241 aaPredicted RBP19.56■□□□□ 0.72
DDX39A-212ENST00000590260 SIGLEC14Q08ET2 396 aa19.56■□□□□ 0.72
DDX39A-212ENST00000590260 INTS6LQ5JSJ4 861 aaKnown RBP19.56■□□□□ 0.72
DDX39A-212ENST00000590260 PARM1Q6UWI2 310 aa19.56■□□□□ 0.72
DDX39A-212ENST00000590260 ZC3H3Q8IXZ2 948 aaKnown RBP19.56■□□□□ 0.72
DDX39A-212ENST00000590260 ADSSL1Q8N142 457 aa19.56■□□□□ 0.72
DDX39A-212ENST00000590260 THEM5Q8N1Q8 247 aa19.56■□□□□ 0.72
DDX39A-212ENST00000590260 TMEM86AQ8N2M4 240 aa19.56■□□□□ 0.72
DDX39A-212ENST00000590260 TMC2Q8TDI7 906 aa19.56■□□□□ 0.72
DDX39A-212ENST00000590260 SMARCE1Q969G3 411 aa19.56■□□□□ 0.72
DDX39A-212ENST00000590260 LPIN3Q9BQK8 851 aa19.56■□□□□ 0.72
DDX39A-212ENST00000590260 ACBD6Q9BR61 282 aa19.56■□□□□ 0.72
DDX39A-212ENST00000590260 HSFX1Q9UBD0 423 aa19.56■□□□□ 0.72
DDX39A-212ENST00000590260 MYBPHLA2RUH7 354 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 TRIM49BA6NDI0 452 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 LRRN2O75325 713 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 KIF20AO95235 890 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 TRIM49P0CI25 452 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 TRIM49CP0CI26 452 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 HAPLN1P10915 354 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-212ENST00000590260 GJA1P17302 382 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 GPR15P49685 360 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 PPP3CAQ08209 521 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 MYO1EQ12965 1108 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 MTMR3Q13615 1198 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 EDRF1Q3B7T1 1238 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 ZACNQ401N2 412 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 DPH6Q7L8W6 267 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 SLC44A3Q8N4M1 653 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 SPATA18Q8TC71 538 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 SDCBP2Q9H190 292 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 VRTNQ9H8Y1 702 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 CRTAC1Q9NQ79 661 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 RMND1Q9NWS8 449 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 GTF3C4Q9UKN8 822 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 MRPS23Q9Y3D9 190 aaKnown RBP19.55■□□□□ 0.72
DDX39A-212ENST00000590260 NUMBLQ9Y6R0 609 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 COL4A3Q01955 1670 aa19.55■□□□□ 0.72
DDX39A-212ENST00000590260 KINO60870 393 aaKnown RBP19.54■□□□□ 0.72
DDX39A-212ENST00000590260 WARSP23381 471 aaKnown RBP19.54■□□□□ 0.72
DDX39A-212ENST00000590260 ADAM9Q13443 819 aa19.54■□□□□ 0.72
DDX39A-212ENST00000590260 TDGQ13569 410 aa19.54■□□□□ 0.72
DDX39A-212ENST00000590260 ANKRD40Q6AI12 368 aa19.54■□□□□ 0.72
DDX39A-212ENST00000590260 FAM171BQ6P995 826 aa19.54■□□□□ 0.72
DDX39A-212ENST00000590260 SV2AQ7L0J3 742 aa19.54■□□□□ 0.72
DDX39A-212ENST00000590260 STKLD1Q8NE28 680 aa19.54■□□□□ 0.72
DDX39A-212ENST00000590260 MCRS1Q96EZ8 462 aa19.54■□□□□ 0.72
DDX39A-212ENST00000590260 ZSWIM3Q96MP5 696 aa19.54■□□□□ 0.72
DDX39A-212ENST00000590260 IGSF9Q9P2J2 1179 aa19.54■□□□□ 0.72
DDX39A-212ENST00000590260 DUSP12Q9UNI6 340 aa19.54■□□□□ 0.72
DDX39A-212ENST00000590260 PTPRDP23468 1912 aa19.54■□□□□ 0.72
DDX39A-212ENST00000590260 KMT2EQ8IZD2 1858 aa19.54■□□□□ 0.72
DDX39A-212ENST00000590260 NCANO14594 1321 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 PPP1R3GB7ZBB8 358 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 SMC2O95347 1197 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 FCARP24071 287 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 VAMP7P51809 220 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 PSMC1P62191 440 aaKnown RBP19.53■□□□□ 0.72
DDX39A-212ENST00000590260 UBE2HP62256 183 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 NCOA4Q13772 614 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 MORC3Q14149 939 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 WDR72Q3MJ13 1102 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 GAREM2Q75VX8 874 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 BMP8AQ7Z5Y6 402 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 FAM186BQ8IYM0 893 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 UBALD2Q8IYN6 164 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 SHKBP1Q8TBC3 707 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 SPPL2BQ8TCT7 592 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 PSMG2Q969U7 264 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 CCDC34Q96HJ3 373 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 ZNF512Q96ME7 567 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-212ENST00000590260 SEPT5Q99719 369 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-212ENST00000590260 PI4K2AQ9BTU6 479 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 MKNK1Q9BUB5 465 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 PLA2G2FQ9BZM2 168 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 SMYD3Q9H7B4 428 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 IL21Q9HBE4 155 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 ABI2Q9NYB9 513 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-212ENST00000590260 FRMD4BQ9Y2L6 1034 aa19.53■□□□□ 0.72
DDX39A-212ENST00000590260 ZFP37Q9Y6Q3 630 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-212ENST00000590260 IKBKBO14920 756 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 TACC1O75410 805 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 MYL4P12829 197 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 ATICP31939 592 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 PSMC2P35998 433 aaKnown RBP19.52■□□□□ 0.72
DDX39A-212ENST00000590260 GCLMP48507 274 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 LHX1P48742 406 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 AP3M2P53677 418 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 CDH8P55286 799 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 MYL7Q01449 175 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 BIRC3Q13489 604 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 MGAT5BQ3V5L5 792 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 STXBP5Q5T5C0 1151 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 IER5LQ5T953 404 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 SPOPLQ6IQ16 392 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 CLEC17AQ6ZS10 378 aa19.52■□□□□ 0.72
DDX39A-212ENST00000590260 PDZD4Q76G19 769 aaPredicted RBP19.52■□□□□ 0.72
DDX39A-212ENST00000590260 DNAJB7Q7Z6W7 309 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms