RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 LRRTM3Q86VH5 581 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 TMEM86AQ8N2M4 240 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 CSGALNACT2Q8N6G5 542 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 C1orf127Q8N9H9 656 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 ZSWIM2Q8NEG5 633 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 SPATA18Q8TC71 538 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 CSGALNACT1Q8TDX6 532 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 FAM3CQ92520 227 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 MSANTD3Q96H12 275 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 IER2Q9BTL4 223 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 PCIF1Q9H4Z3 704 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 TASP1Q9H6P5 420 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 KIAA1586Q9HCI6 787 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 OBP2AQ9NY56 170 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 R3HCC1Q9Y3T6 440 aaKnown RBP15.46■□□□□ 0.07
MBD1-220ENST00000589758 PCDHB5Q9Y5E4 795 aa15.46■□□□□ 0.07
MBD1-220ENST00000589758 PATJQ8NI35 1801 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 USP34Q70CQ2 3546 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 GOLGA8IPA6NC78 632 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 ZNF233A6NK53 670 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 GOLGA8JA6NMD2 632 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 EIF3DO15371 548 aaKnown RBP eCLIP15.45■□□□□ 0.06
MBD1-220ENST00000589758 KRT19P08727 400 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 TMEM191BP0C7N4 346 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 HAPLN1P10915 354 aaPredicted RBP15.45■□□□□ 0.06
MBD1-220ENST00000589758 ATF6P18850 670 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 RBP5P82980 135 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 FCHO2Q0JRZ9 810 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 FZD5Q13467 585 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 GPR158Q5T848 1215 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 CNNM4Q6P4Q7 775 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 NOC3LQ8WTT2 800 aaKnown RBP15.45■□□□□ 0.06
MBD1-220ENST00000589758 ANKRD36BP1Q96IX9 119 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 LPIN3Q9BQK8 851 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 ACBD6Q9BR61 282 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 FGFBP2Q9BYJ0 223 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 TRIM9Q9C026 710 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 C8orf33Q9H7E9 229 aaPredicted RBP15.45■□□□□ 0.06
MBD1-220ENST00000589758 PDE11AQ9HCR9 933 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 GDAP2Q9NXN4 497 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 ABI2Q9NYB9 513 aaPredicted RBP15.45■□□□□ 0.06
MBD1-220ENST00000589758 NDRG2Q9UN36 371 aaKnown RBP15.45■□□□□ 0.06
MBD1-220ENST00000589758 PIAS3Q9Y6X2 628 aa15.45■□□□□ 0.06
MBD1-220ENST00000589758 COL4A2P08572 1712 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 SHISA7A6NL88 538 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 KINO60870 393 aaKnown RBP15.44■□□□□ 0.06
MBD1-220ENST00000589758 ANP32AP39687 249 aaKnown RBP15.44■□□□□ 0.06
MBD1-220ENST00000589758 WNT7BP56706 349 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 MYL7Q01449 175 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 CSTF1Q05048 431 aaKnown RBP15.44■□□□□ 0.06
MBD1-220ENST00000589758 BFSP1Q12934 665 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 MYO1EQ12965 1108 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 ARHGAP29Q52LW3 1261 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 STXBP5Q5T5C0 1151 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 ATL3Q6DD88 541 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 SHC4Q6S5L8 630 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 MAMSTRQ6ZN01 415 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 ZNF687Q8N1G0 1237 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 PDCL2Q8N4E4 241 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 TOP6BLQ8N6T0 577 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 ZNF507Q8TCN5 953 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 LEO1Q8WVC0 666 aaPredicted RBP15.44■□□□□ 0.06
MBD1-220ENST00000589758 DHX58Q96C10 678 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 MKNK1Q9BUB5 465 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 MAGEF1Q9HAY2 307 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 INTS13Q9NVM9 706 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 DDX43Q9NXZ2 648 aaKnown RBP15.44■□□□□ 0.06
MBD1-220ENST00000589758 CFAP45Q9UL16 551 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 L1RE1Q9UN81 338 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 PCDHGA2Q9Y5H1 932 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 TICRRQ7Z2Z1 1910 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 ZFHX2Q9C0A1 2572 aaPredicted RBP15.44■□□□□ 0.06
MBD1-220ENST00000589758 FANCMQ8IYD8 2048 aa15.44■□□□□ 0.06
MBD1-220ENST00000589758 NUP210Q8TEM1 1887 aaPredicted RBP15.44■□□□□ 0.06
MBD1-220ENST00000589758 NCANO14594 1321 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 MYO15AQ9UKN7 3530 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 ARNTLO00327 626 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 PRPF40AO75400 957 aaKnown RBP15.43■□□□□ 0.06
MBD1-220ENST00000589758 TNNC2P02585 160 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 LHX1P48742 406 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 KPNA1P52294 538 aaPredicted RBP15.43■□□□□ 0.06
MBD1-220ENST00000589758 SNRPFP62306 86 aaKnown RBP15.43■□□□□ 0.06
MBD1-220ENST00000589758 ASIC1P78348 528 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 PPP2R5DQ14738 602 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 FAM26FQ5R3K3 315 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 DPH6Q7L8W6 267 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 CXorf38Q8TB03 319 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 GIPC2Q8TF65 315 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 RSPRY1Q96DX4 576 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 C7orf25Q9BPX7 421 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 FAM126AQ9BYI3 521 aaPredicted RBP15.43■□□□□ 0.06
MBD1-220ENST00000589758 CHRDQ9H2X0 955 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 LMAN1LQ9HAT1 526 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 IL21Q9HBE4 155 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 ABCB6Q9NP58 842 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 FAM13BQ9NYF5 915 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 HSPBP1Q9NZL4 362 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 SNX9Q9Y5X1 595 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 CACNA1IQ9P0X4 2223 aa15.43■□□□□ 0.06
MBD1-220ENST00000589758 UBE4BO95155 1302 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms