RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 PHOSPHO2Q8TCD6 241 aa26.35■■□□□ 1.81
RFX1-205ENST00000589239 ZSWIM1Q9BR11 485 aa26.35■■□□□ 1.81
RFX1-205ENST00000589239 SEPT11Q9NVA2 429 aaKnown RBP26.35■■□□□ 1.81
RFX1-205ENST00000589239 A0A087X0T9 212 aa26.35■■□□□ 1.81
RFX1-205ENST00000589239 GABRDO14764 452 aa26.35■■□□□ 1.81
RFX1-205ENST00000589239 THAP12O43422 761 aa26.35■■□□□ 1.81
RFX1-205ENST00000589239 FAM228BP0C875 321 aa26.35■■□□□ 1.81
RFX1-205ENST00000589239 BRD2P25440 801 aaKnown RBP26.35■■□□□ 1.81
RFX1-205ENST00000589239 CYLC1P35663 651 aaPredicted RBP26.35■■□□□ 1.81
RFX1-205ENST00000589239 ACOT1Q86TX2 421 aa26.35■■□□□ 1.81
RFX1-205ENST00000589239 UNC93AQ86WB7 457 aa26.35■■□□□ 1.81
RFX1-205ENST00000589239 LNX1Q8TBB1 728 aaPredicted RBP26.35■■□□□ 1.81
RFX1-205ENST00000589239 TFAP2BQ92481 460 aa26.35■■□□□ 1.81
RFX1-205ENST00000589239 GPR62Q9BZJ7 368 aa26.35■■□□□ 1.81
RFX1-205ENST00000589239 INSL6Q9Y581 213 aa26.35■■□□□ 1.81
RFX1-205ENST00000589239 DDX3XO00571 662 aaKnown RBP eCLIP26.34■■□□□ 1.81
RFX1-205ENST00000589239 PAEPP09466 180 aa26.34■■□□□ 1.81
RFX1-205ENST00000589239 CD19P15391 556 aa26.34■■□□□ 1.81
RFX1-205ENST00000589239 SSTR3P32745 418 aaPredicted RBP26.34■■□□□ 1.81
RFX1-205ENST00000589239 CDR2Q01850 454 aa26.34■■□□□ 1.81
RFX1-205ENST00000589239 KCNT2Q6UVM3 1135 aa26.34■■□□□ 1.81
RFX1-205ENST00000589239 PALB2Q86YC2 1186 aa26.34■■□□□ 1.81
RFX1-205ENST00000589239 ACRBPQ8NEB7 543 aa26.34■■□□□ 1.81
RFX1-205ENST00000589239 ZNF606Q8WXB4 792 aa26.34■■□□□ 1.81
RFX1-205ENST00000589239 HEXIM2Q96MH2 286 aaKnown RBP26.34■■□□□ 1.81
RFX1-205ENST00000589239 DDX43Q9NXZ2 648 aaKnown RBP26.34■■□□□ 1.81
RFX1-205ENST00000589239 ZNF263O14978 683 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 TRAPPC3O43617 180 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 FMO1Q01740 532 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 CYP27A1Q02318 531 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 VPS36Q86VN1 386 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 C12orf29Q8N999 325 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 PCDHB8Q9UN66 801 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 FAM170AA1A519 330 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 CYP11A1P05108 521 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 CFHP08603 1231 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 FAM163BP0C2L3 166 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 TNFAIP3P21580 790 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 ACAT1P24752 427 aaKnown RBP26.33■■□□□ 1.81
RFX1-205ENST00000589239 BMS1Q14692 1282 aaKnown RBP26.33■■□□□ 1.81
RFX1-205ENST00000589239 SLC18A3Q16572 532 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 SMYD5Q6GMV2 418 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 FUT10Q6P4F1 479 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 RAD9AQ99638 391 aa26.33■■□□□ 1.81
RFX1-205ENST00000589239 TLL1O43897 1013 aa26.32■■□□□ 1.8
RFX1-205ENST00000589239 TKTP29401 623 aaKnown RBP26.32■■□□□ 1.8
RFX1-205ENST00000589239 GABPB1Q06547 395 aaPredicted RBP26.32■■□□□ 1.8
RFX1-205ENST00000589239 SHHQ15465 462 aa26.32■■□□□ 1.8
RFX1-205ENST00000589239 PCDHB18PQ96TA0 734 aa26.32■■□□□ 1.8
RFX1-205ENST00000589239 LPIN3Q9BQK8 851 aa26.32■■□□□ 1.8
RFX1-205ENST00000589239 DSEQ9UL01 958 aa26.32■■□□□ 1.8
RFX1-205ENST00000589239 EIF3CLB5ME19 914 aaKnown RBP26.32■■□□□ 1.8
RFX1-205ENST00000589239 SF3B1O75533 1304 aaKnown RBP eCLIP26.32■■□□□ 1.8
RFX1-205ENST00000589239 LHX1P48742 406 aa26.32■■□□□ 1.8
RFX1-205ENST00000589239 FAM171A1Q5VUB5 890 aa26.32■■□□□ 1.8
RFX1-205ENST00000589239 METTL23Q86XA0 190 aa26.32■■□□□ 1.8
RFX1-205ENST00000589239 ZNF677Q86XU0 584 aa26.32■■□□□ 1.8
RFX1-205ENST00000589239 SLC30A5Q8TAD4 765 aa26.32■■□□□ 1.8
RFX1-205ENST00000589239 B3GALT6Q96L58 329 aa26.32■■□□□ 1.8
RFX1-205ENST00000589239 RNPC3Q96LT9 517 aaKnown RBP26.32■■□□□ 1.8
RFX1-205ENST00000589239 ZNF558Q96NG5 402 aa26.32■■□□□ 1.8
RFX1-205ENST00000589239 EIF3CQ99613 913 aaKnown RBP26.32■■□□□ 1.8
RFX1-205ENST00000589239 REXO2Q9Y3B8 237 aaKnown RBP26.32■■□□□ 1.8
RFX1-205ENST00000589239 PSMC1P62191 440 aaKnown RBP26.31■■□□□ 1.8
RFX1-205ENST00000589239 OVOS1Q6IE37 1185 aa26.31■■□□□ 1.8
RFX1-205ENST00000589239 FIBCD1Q8N539 461 aa26.31■■□□□ 1.8
RFX1-205ENST00000589239 IGSF21Q96ID5 467 aa26.31■■□□□ 1.8
RFX1-205ENST00000589239 LCHNA4D1U4 455 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 LAG3P18627 525 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 TYMPP19971 482 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 ANXA13P27216 316 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 KIAA0319Q5VV43 1072 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 CEP57Q86XR8 500 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 DNAAF5Q86Y56 855 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 COLGALT1Q8NBJ5 622 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 RTP3Q9BQQ7 232 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 ADGRG1Q9Y653 693 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 TNRC18O15417 2968 aaPredicted RBP26.3■■□□□ 1.8
RFX1-205ENST00000589239 ARHGEF37A1IGU5 675 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 ATP2C2O75185 946 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 RABGGTBP53611 331 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 YWHAHQ04917 246 aaPredicted RBP26.3■■□□□ 1.8
RFX1-205ENST00000589239 CCDC142Q17RM4 750 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 PASD1Q8IV76 773 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 CRYBG2Q8N1P7 616 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 FAM49BQ9NUQ9 324 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 NAGPAQ9UK23 515 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 TSC2P49815 1807 aa26.3■■□□□ 1.8
RFX1-205ENST00000589239 LCA5LO95447 670 aa26.29■■□□□ 1.8
RFX1-205ENST00000589239 LINC00271P0C7V0 271 aa26.29■■□□□ 1.8
RFX1-205ENST00000589239 VDRP11473 427 aa26.29■■□□□ 1.8
RFX1-205ENST00000589239 FAM109BQ6ICB4 259 aaPredicted RBP26.29■■□□□ 1.8
RFX1-205ENST00000589239 TAS1R1Q7RTX1 841 aa26.29■■□□□ 1.8
RFX1-205ENST00000589239 SLC39A11Q8N1S5 342 aa26.29■■□□□ 1.8
RFX1-205ENST00000589239 B3GALNT2Q8NCR0 500 aa26.29■■□□□ 1.8
RFX1-205ENST00000589239 TNIP3Q96KP6 325 aa26.29■■□□□ 1.8
RFX1-205ENST00000589239 TMCO5BA8MYB1 307 aa26.29■■□□□ 1.8
RFX1-205ENST00000589239 SYN3O14994 580 aa26.29■■□□□ 1.8
RFX1-205ENST00000589239 IPO7O95373 1038 aaKnown RBP26.29■■□□□ 1.8
RFX1-205ENST00000589239 CDR1P51861 262 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms