RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 VEPH1Q14D04 833 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 E2F4Q16254 413 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 ZNF528Q3MIS6 628 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 SCARA3Q6AZY7 606 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 GPIHBP1Q8IV16 184 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 CCDC65Q8IXS2 484 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 GLIS3Q8NEA6 775 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 FAM200AQ8TCP9 573 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 SPPL2BQ8TCT7 592 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 NOC3LQ8WTT2 800 aaKnown RBP20.24■□□□□ 0.83
TRIM47-205ENST00000587774 HPS3Q969F9 1004 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 E2F7Q96AV8 911 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 ATXN3LQ9H3M9 355 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 PCIF1Q9H4Z3 704 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 ABI2Q9NYB9 513 aaPredicted RBP20.24■□□□□ 0.83
TRIM47-205ENST00000587774 AGAP1Q9UPQ3 857 aa20.24■□□□□ 0.83
TRIM47-205ENST00000587774 MAN2B1O00754 1011 aa20.23■□□□□ 0.83
TRIM47-205ENST00000587774 EXTL3O43909 919 aa20.23■□□□□ 0.83
TRIM47-205ENST00000587774 FGF19O95750 216 aa20.23■□□□□ 0.83
TRIM47-205ENST00000587774 CYP4F8P98187 520 aa20.23■□□□□ 0.83
TRIM47-205ENST00000587774 FCHO2Q0JRZ9 810 aa20.23■□□□□ 0.83
TRIM47-205ENST00000587774 GPR158Q5T848 1215 aa20.23■□□□□ 0.83
TRIM47-205ENST00000587774 ARID3BQ8IVW6 561 aaPredicted RBP20.23■□□□□ 0.83
TRIM47-205ENST00000587774 CXorf38Q8TB03 319 aa20.23■□□□□ 0.83
TRIM47-205ENST00000587774 C2orf15Q8WU43 125 aaKnown RBP20.23■□□□□ 0.83
TRIM47-205ENST00000587774 TMEM206Q9H813 350 aa20.23■□□□□ 0.83
TRIM47-205ENST00000587774 IL21Q9HBE4 155 aa20.23■□□□□ 0.83
TRIM47-205ENST00000587774 TFIP11Q9UBB9 837 aaKnown RBP20.23■□□□□ 0.83
TRIM47-205ENST00000587774 PPP6R2O75170 966 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 PRAMEF12O95522 483 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 HAPLN1P10915 354 aaPredicted RBP20.22■□□□□ 0.83
TRIM47-205ENST00000587774 CSTF1Q05048 431 aaKnown RBP20.22■□□□□ 0.83
TRIM47-205ENST00000587774 MTAPQ13126 283 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 TSSK4Q6SA08 328 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 YAF2Q8IY57 180 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 GPD1LQ8N335 351 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 PDCL2Q8N4E4 241 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 GIPC2Q8TF65 315 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 FAM3CQ92520 227 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 LRRC3BQ96PB8 259 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 TRIM9Q9C026 710 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 MTMR12Q9C0I1 747 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 PDE11AQ9HCR9 933 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 PRMT8Q9NR22 394 aaPredicted RBP20.22■□□□□ 0.83
TRIM47-205ENST00000587774 TMLHEQ9NVH6 421 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 KBTBD4Q9NVX7 518 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 ITGA11Q9UKX5 1188 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 L1RE1Q9UN81 338 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 PTPRJQ12913 1337 aa20.22■□□□□ 0.83
TRIM47-205ENST00000587774 SLC38A8A6NNN8 435 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 CHADO15335 359 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 KINO60870 393 aaKnown RBP20.21■□□□□ 0.83
TRIM47-205ENST00000587774 YEATS4O95619 227 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 SMARCB1Q12824 385 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 BFSP1Q12934 665 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 ARHGAP15Q53QZ3 475 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 FOXD4L5Q5VV16 416 aaPredicted RBP20.21■□□□□ 0.83
TRIM47-205ENST00000587774 DCP1BQ8IZD4 617 aaKnown RBP20.21■□□□□ 0.83
TRIM47-205ENST00000587774 LRRC52Q8N7C0 313 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 CSGALNACT1Q8TDX6 532 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 CACTINQ8WUQ7 758 aaKnown RBP20.21■□□□□ 0.83
TRIM47-205ENST00000587774 FOXD4L4Q8WXT5 416 aaPredicted RBP20.21■□□□□ 0.83
TRIM47-205ENST00000587774 DHX58Q96C10 678 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 ZNF396Q96N95 335 aaPredicted RBP20.21■□□□□ 0.83
TRIM47-205ENST00000587774 CHRDQ9H2X0 955 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 SIX4Q9UIU6 781 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 PCDHB5Q9Y5E4 795 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 MYOFQ9NZM1 2061 aa20.21■□□□□ 0.83
TRIM47-205ENST00000587774 KRT19P08727 400 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 CCNE1P24864 410 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 CDC25CP30307 473 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 TSPY1Q01534 308 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 LMBRD2Q68DH5 695 aaPredicted RBP20.2■□□□□ 0.82
TRIM47-205ENST00000587774 SHC4Q6S5L8 630 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 CSGALNACT2Q8N6G5 542 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 SUMF1Q8NBK3 374 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 STKLD1Q8NE28 680 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 SNX21Q969T3 373 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 ZFYVE19Q96K21 471 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 GCNAQ96QF7 691 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 CUEDC2Q9H467 287 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 TASP1Q9H6P5 420 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 DDX43Q9NXZ2 648 aaKnown RBP20.2■□□□□ 0.82
TRIM47-205ENST00000587774 PCDHGA2Q9Y5H1 932 aa20.2■□□□□ 0.82
TRIM47-205ENST00000587774 CUTAO60888 179 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 HUS1O60921 280 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 TMEM191BP0C7N4 346 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 ACAT1P24752 427 aaKnown RBP20.19■□□□□ 0.82
TRIM47-205ENST00000587774 HOXD13P35453 343 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 SOX9P48436 509 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 GPR15P49685 360 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 ASIC1P78348 528 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 TAF12Q16514 161 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 CCDC142Q17RM4 750 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 STXBP4Q6ZWJ1 553 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 ZBTB44Q8NCP5 570 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 LEO1Q8WVC0 666 aaPredicted RBP20.19■□□□□ 0.82
TRIM47-205ENST00000587774 NELL1Q92832 810 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 MSANTD3Q96H12 275 aa20.19■□□□□ 0.82
TRIM47-205ENST00000587774 HINFPQ9BQA5 517 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms