RNA–Protein interactions for RNA: ENST00000586940.1

RFX2-206, Transcript of regulatory factor X2, human

TSL 3

Gene RFX2, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-206	ENST00000586940	ZNF252P-AS1	Q0IIN9	211 aa		13.61	□□□□□ -0.23
RFX2-206	ENST00000586940	BFSP1	Q12934	665 aa		13.61	□□□□□ -0.23
RFX2-206	ENST00000586940	FOXC1	Q12948	553 aa		13.61	□□□□□ -0.23
RFX2-206	ENST00000586940	REST	Q13127	1097 aa		13.61	□□□□□ -0.23
RFX2-206	ENST00000586940	KARS	Q15046	597 aa	Known RBP	13.61	□□□□□ -0.23
RFX2-206	ENST00000586940	FSTL4	Q6MZW2	842 aa		13.61	□□□□□ -0.23
RFX2-206	ENST00000586940	RINT1	Q6NUQ1	792 aa		13.61	□□□□□ -0.23
RFX2-206	ENST00000586940	TTC9B	Q8N6N2	239 aa		13.61	□□□□□ -0.23
RFX2-206	ENST00000586940	RUSC1	Q9BVN2	902 aa		13.61	□□□□□ -0.23
RFX2-206	ENST00000586940	SMG9	Q9H0W8	520 aa	Known RBP	13.61	□□□□□ -0.23
RFX2-206	ENST00000586940	ZMIZ1	Q9ULJ6	1067 aa		13.61	□□□□□ -0.23
RFX2-206	ENST00000586940	TPR	P12270	2363 aa	Known RBP	13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	LAD1	O00515	517 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	TRDMT1	O14717	391 aa	Known RBP	13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	CAVIN2	O95810	425 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	DRD1	P21728	446 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	MAPK7	Q13164	816 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	COL9A2	Q14055	689 aa	Predicted RBP	13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	PDIA5	Q14554	519 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	KYAT1	Q16773	422 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	TCEAL6	Q6IPX3	200 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	C1orf186	Q6ZWK4	172 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	BRAP	Q7Z569	592 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	CMTM8	Q8IZV2	173 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	TMEM130	Q8N3G9	435 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	IGSF22	Q8N9C0	903 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	SPIRE2	Q8WWL2	714 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	TCEAL3	Q969E4	200 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	HHIP	Q96QV1	700 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	NTPCR	Q9BSD7	190 aa	Known RBP	13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	KIF9	Q9HAQ2	790 aa		13.6	□□□□□ -0.23
RFX2-206	ENST00000586940	TTC26	A0AVF1	554 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	C4orf47	A7E2U8	309 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	LACTBL1	A8MY62	500 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	EGF	P01133	1207 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	PLS3	P13797	630 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	DDX6	P26196	483 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	GBP1	P32455	592 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	PRPH	P41219	470 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	GUCY2F	P51841	1108 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	ATP2C1	P98194	919 aa	Predicted RBP	13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	ZBTB6	Q15916	424 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	FBXO43	Q4G163	708 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	SLC39A12	Q504Y0	691 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	TRIM68	Q6AZZ1	485 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	ATL3	Q6DD88	541 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	METTL23	Q86XA0	190 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	GIPC2	Q8TF65	315 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	ACD	Q96AP0	544 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	SENP8	Q96LD8	212 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	TSPAN18	Q96SJ8	248 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	FAM83C	Q9BQN1	747 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	SLC46A2	Q9BY10	475 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	EBF3	Q9H4W6	596 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	RPF1	Q9H9Y2	349 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	HPS4	Q9NQG7	708 aa		13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	PDCD11	Q14690	1871 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-206	ENST00000586940	TMEM8B	A6NDV4	472 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	PP2D1	A8MPX8	630 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940		H0YCG3	227 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	APBB3	O95704	486 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	MAPT	P10636	758 aa	Known RBP	13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	ATF6	P18850	670 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	GUCY2C	P25092	1073 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	TNFSF9	P41273	254 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	LIG4	P49917	911 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	LILRA4	P59901	499 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	RAD51AP2	Q09MP3	1159 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	PSMD2	Q13200	908 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	ZRSR1	Q15695	479 aa	Known RBP	13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	DTHD1	Q6ZMT9	781 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	C11orf74	Q86VG3	221 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	THEM5	Q8N1Q8	247 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	MAB21L3	Q8N8X9	362 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	TMEM161B	Q8NDZ6	487 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	OR10T2	Q8NGX3	314 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	RPLP0P6	Q8NHW5	317 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	SPPL2B	Q8TCT7	592 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	C2orf15	Q8WU43	125 aa	Known RBP	13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	FAM212A	Q96EL1	285 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	P2RY13	Q9BPV8	354 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	ADAM33	Q9BZ11	813 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	IL21	Q9HBE4	155 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	DSE	Q9UL01	958 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	SPTBN2	O15020	2390 aa		13.58	□□□□□ -0.24
RFX2-206	ENST00000586940	FRYL	O94915	3013 aa		13.57	□□□□□ -0.24
RFX2-206	ENST00000586940	BCLAF3	A2AJT9	711 aa	Known RBP	13.57	□□□□□ -0.24
RFX2-206	ENST00000586940	PPEF2	O14830	753 aa		13.57	□□□□□ -0.24
RFX2-206	ENST00000586940	GIPC1	O14908	333 aa		13.57	□□□□□ -0.24
RFX2-206	ENST00000586940	KHNYN	O15037	678 aa	Known RBP	13.57	□□□□□ -0.24
RFX2-206	ENST00000586940	DCLK1	O15075	740 aa		13.57	□□□□□ -0.24
RFX2-206	ENST00000586940	CDC25A	P30304	524 aa		13.57	□□□□□ -0.24
RFX2-206	ENST00000586940	GALK1	P51570	392 aa		13.57	□□□□□ -0.24
RFX2-206	ENST00000586940	DGKE	P52429	567 aa		13.57	□□□□□ -0.24
RFX2-206	ENST00000586940	KRT85	P78386	507 aa		13.57	□□□□□ -0.24
RFX2-206	ENST00000586940	SMARCB1	Q12824	385 aa		13.57	□□□□□ -0.24
RFX2-206	ENST00000586940	DMC1	Q14565	340 aa		13.57	□□□□□ -0.24
RFX2-206	ENST00000586940	PDGFRL	Q15198	375 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms