RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 ZC2HC1CQ53FD0 456 aaPredicted RBP16.46■□□□□ 0.23
MBD1-215ENST00000586884 WDR44Q5JSH3 913 aa16.46■□□□□ 0.23
MBD1-215ENST00000586884 LARP1BQ659C4 914 aaKnown RBP16.46■□□□□ 0.23
MBD1-215ENST00000586884 Q6ZS52 159 aa16.46■□□□□ 0.23
MBD1-215ENST00000586884 NT5DC4Q86YG4 428 aa16.46■□□□□ 0.23
MBD1-215ENST00000586884 KRI1Q8N9T8 703 aaKnown RBP16.46■□□□□ 0.23
MBD1-215ENST00000586884 HVCN1Q96D96 273 aa16.46■□□□□ 0.23
MBD1-215ENST00000586884 TSC2P49815 1807 aa16.46■□□□□ 0.23
MBD1-215ENST00000586884 TISP43B9A030 160 aa16.45■□□□□ 0.22
MBD1-215ENST00000586884 HRO43593 1189 aa16.45■□□□□ 0.22
MBD1-215ENST00000586884 IL18RAPO95256 599 aa16.45■□□□□ 0.22
MBD1-215ENST00000586884 CD2BP2O95400 341 aaKnown RBP16.45■□□□□ 0.22
MBD1-215ENST00000586884 GRIN1Q05586 938 aa16.45■□□□□ 0.22
MBD1-215ENST00000586884 DMWDQ09019 674 aa16.45■□□□□ 0.22
MBD1-215ENST00000586884 PON2Q15165 354 aa16.45■□□□□ 0.22
MBD1-215ENST00000586884 PTPAQ15257 358 aa16.45■□□□□ 0.22
MBD1-215ENST00000586884 SF3A1Q15459 793 aaKnown RBP16.45■□□□□ 0.22
MBD1-215ENST00000586884 ITPRIPL2Q3MIP1 535 aa16.45■□□□□ 0.22
MBD1-215ENST00000586884 SV2CQ496J9 727 aa16.45■□□□□ 0.22
MBD1-215ENST00000586884 DCP1BQ8IZD4 617 aaKnown RBP16.45■□□□□ 0.22
MBD1-215ENST00000586884 TTC8Q8TAM2 541 aa16.45■□□□□ 0.22
MBD1-215ENST00000586884 NETO1Q8TDF5 533 aa16.45■□□□□ 0.22
MBD1-215ENST00000586884 NUP210Q8TEM1 1887 aaPredicted RBP16.44■□□□□ 0.22
MBD1-215ENST00000586884 SOBPA7XYQ1 873 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 KPNA7A9QM74 516 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 FOXD2O60548 495 aaPredicted RBP16.44■□□□□ 0.22
MBD1-215ENST00000586884 HAPLN1P10915 354 aaPredicted RBP16.44■□□□□ 0.22
MBD1-215ENST00000586884 DDX6P26196 483 aaKnown RBP eCLIP16.44■□□□□ 0.22
MBD1-215ENST00000586884 PNPLA4P41247 253 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 TNK2Q07912 1038 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 POSTNQ15063 836 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 WSCD1Q658N2 575 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 ZNF720Q7Z2F6 126 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.44■□□□□ 0.22
MBD1-215ENST00000586884 LRRTM3Q86VH5 581 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 CMTM8Q8IZV2 173 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 GIPC2Q8TF65 315 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 POMGNT1Q8WZA1 660 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 ZNF560Q96MR9 790 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 SLC46A2Q9BY10 475 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 SEMA4GQ9NTN9 838 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 ABI2Q9NYB9 513 aaPredicted RBP16.44■□□□□ 0.22
MBD1-215ENST00000586884 SEL1LQ9UBV2 794 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 STK17AQ9UEE5 414 aa16.44■□□□□ 0.22
MBD1-215ENST00000586884 PPP1R37O75864 691 aa16.43■□□□□ 0.22
MBD1-215ENST00000586884 AVPR1AP37288 418 aa16.43■□□□□ 0.22
MBD1-215ENST00000586884 CSRP2Q16527 193 aa16.43■□□□□ 0.22
MBD1-215ENST00000586884 HEATR6Q6AI08 1181 aaKnown RBP16.43■□□□□ 0.22
MBD1-215ENST00000586884 CRELD2Q6UXH1 353 aaPredicted RBP16.43■□□□□ 0.22
MBD1-215ENST00000586884 SFR1Q86XK3 245 aa16.43■□□□□ 0.22
MBD1-215ENST00000586884 EFCAB13Q8IY85 973 aa16.43■□□□□ 0.22
MBD1-215ENST00000586884 FAM83CQ9BQN1 747 aa16.43■□□□□ 0.22
MBD1-215ENST00000586884 KIF9Q9HAQ2 790 aa16.43■□□□□ 0.22
MBD1-215ENST00000586884 UPF2Q9HAU5 1272 aaKnown RBP16.43■□□□□ 0.22
MBD1-215ENST00000586884 CCDC39Q9UFE4 941 aa16.43■□□□□ 0.22
MBD1-215ENST00000586884 EXOC7Q9UPT5 735 aa16.43■□□□□ 0.22
MBD1-215ENST00000586884 PCDHB5Q9Y5E4 795 aa16.43■□□□□ 0.22
MBD1-215ENST00000586884 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.43■□□□□ 0.22
MBD1-215ENST00000586884 DCDC2BA2VCK2 349 aa16.42■□□□□ 0.22
MBD1-215ENST00000586884 SLC30A4O14863 429 aa16.42■□□□□ 0.22
MBD1-215ENST00000586884 ADSSP30520 456 aa16.42■□□□□ 0.22
MBD1-215ENST00000586884 NLRP12P59046 1061 aa16.42■□□□□ 0.22
MBD1-215ENST00000586884 TSPY1Q01534 308 aa16.42■□□□□ 0.22
MBD1-215ENST00000586884 SRSF5Q13243 272 aaKnown RBP16.42■□□□□ 0.22
MBD1-215ENST00000586884 NFE2Q16621 373 aaPredicted RBP16.42■□□□□ 0.22
MBD1-215ENST00000586884 PRR23CQ6ZRP0 262 aa16.42■□□□□ 0.22
MBD1-215ENST00000586884 TMEM150AQ86TG1 271 aa16.42■□□□□ 0.22
MBD1-215ENST00000586884 WDR5BQ86VZ2 330 aa16.42■□□□□ 0.22
MBD1-215ENST00000586884 LEO1Q8WVC0 666 aaPredicted RBP16.42■□□□□ 0.22
MBD1-215ENST00000586884 STRA6Q9BX79 667 aa16.42■□□□□ 0.22
MBD1-215ENST00000586884 SMG9Q9H0W8 520 aaKnown RBP16.42■□□□□ 0.22
MBD1-215ENST00000586884 GKN1Q9NS71 199 aa16.42■□□□□ 0.22
MBD1-215ENST00000586884 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.41■□□□□ 0.22
MBD1-215ENST00000586884 F11P03951 625 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 CSH1P0DML2 217 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 CSH2P0DML3 217 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 HMGA1P17096 107 aaKnown RBP16.41■□□□□ 0.22
MBD1-215ENST00000586884 GAP43P17677 238 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 CDR1P51861 262 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 AMPD2Q01433 879 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 BFSP1Q12934 665 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 RUNX3Q13761 415 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 TMEM196Q5HYL7 178 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 CEP68Q76N32 757 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 DYMQ7RTS9 669 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 MAB21L3Q8N8X9 362 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 MRPS31Q92665 395 aaKnown RBP16.41■□□□□ 0.22
MBD1-215ENST00000586884 USP13Q92995 863 aaPredicted RBP16.41■□□□□ 0.22
MBD1-215ENST00000586884 EPSTI1Q96J88 318 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 IKZF4Q9H2S9 585 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 MRPL44Q9H9J2 332 aaKnown RBP16.41■□□□□ 0.22
MBD1-215ENST00000586884 ABCB6Q9NP58 842 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 TDP1Q9NUW8 608 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 C2orf42Q9NWW7 574 aa16.41■□□□□ 0.22
MBD1-215ENST00000586884 CCDC163A0A0D9SF12 145 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 TRDMT1O14717 391 aaKnown RBP16.4■□□□□ 0.22
MBD1-215ENST00000586884 ATG13O75143 517 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 PRPF40AO75400 957 aaKnown RBP16.4■□□□□ 0.22
MBD1-215ENST00000586884 TXLNAP40222 546 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 TFAMQ00059 246 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms