RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 WDR44Q5JSH3 913 aa12.11□□□□□ -0.47
CCDC47-206ENST00000584112 HAUS6Q7Z4H7 955 aa12.11□□□□□ -0.47
CCDC47-206ENST00000584112 LSM14AQ8ND56 463 aaKnown RBP12.11□□□□□ -0.47
CCDC47-206ENST00000584112 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
CCDC47-206ENST00000584112 RAD54LQ92698 747 aa12.11□□□□□ -0.47
CCDC47-206ENST00000584112 INTS4Q96HW7 963 aaKnown RBP12.11□□□□□ -0.47
CCDC47-206ENST00000584112 ZBTB45Q96K62 511 aaPredicted RBP12.11□□□□□ -0.47
CCDC47-206ENST00000584112 ZMAT2Q96NC0 199 aaKnown RBP12.11□□□□□ -0.47
CCDC47-206ENST00000584112 PRORYQ9H606 182 aa12.11□□□□□ -0.47
CCDC47-206ENST00000584112 PLEKHA5Q9HAU0 1116 aa12.11□□□□□ -0.47
CCDC47-206ENST00000584112 PARVGQ9HBI0 331 aa12.11□□□□□ -0.47
CCDC47-206ENST00000584112 BLOC1S4Q9NUP1 217 aa12.11□□□□□ -0.47
CCDC47-206ENST00000584112 NUB1Q9Y5A7 615 aa12.11□□□□□ -0.47
CCDC47-206ENST00000584112 BACE2Q9Y5Z0 518 aa12.11□□□□□ -0.47
CCDC47-206ENST00000584112 CDY1Q9Y6F8 540 aa12.11□□□□□ -0.47
CCDC47-206ENST00000584112 DENND4CQ5VZ89 1909 aa12.11□□□□□ -0.47
CCDC47-206ENST00000584112 BCLAF3A2AJT9 711 aaKnown RBP12.1□□□□□ -0.47
CCDC47-206ENST00000584112 H7C4K7 107 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 K7ENM7 598 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 HNRNPDLO14979 420 aaKnown RBP12.1□□□□□ -0.47
CCDC47-206ENST00000584112 SYN3O14994 580 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 TBCAO75347 108 aaKnown RBP12.1□□□□□ -0.47
CCDC47-206ENST00000584112 POU2F2P09086 479 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 CLTAP09496 248 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 ABCG1P45844 678 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 BRCC3P46736 316 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 LIG4P49917 911 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 ZNF131P52739 623 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 SOX4Q06945 474 aaPredicted RBP12.1□□□□□ -0.47
CCDC47-206ENST00000584112 MCM6Q14566 821 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 KARSQ15046 597 aaKnown RBP12.1□□□□□ -0.47
CCDC47-206ENST00000584112 SLC10A6Q3KNW5 377 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 AXDND1Q5T1B0 1012 aaPredicted RBP12.1□□□□□ -0.47
CCDC47-206ENST00000584112 PIP4P1Q86T03 277 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 MYCT1Q8N699 235 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 PNPLA1Q8N8W4 532 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 C3orf58Q8NDZ4 430 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 DCBLD2Q96PD2 775 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 CCSER1Q9C0I3 900 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 DUSP15Q9H1R2 295 aaPredicted RBP12.1□□□□□ -0.47
CCDC47-206ENST00000584112 CCDC39Q9UFE4 941 aa12.1□□□□□ -0.47
CCDC47-206ENST00000584112 GON4LQ3T8J9 2241 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 I3L4J1 428 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 CAPN9O14815 690 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 ADAM12O43184 909 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 XPOTO43592 962 aaKnown RBP12.09□□□□□ -0.47
CCDC47-206ENST00000584112 TRAK2O60296 914 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 PIGRP01833 764 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 SYT1P21579 422 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 TXLNAP40222 546 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 IRX4P78413 519 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 GRIN1Q05586 938 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 PPP2R3AQ06190 1150 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 GRM2Q14416 872 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 CD300LGQ6UXG3 332 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 SLC7A14Q8TBB6 771 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 C18orf25Q96B23 403 aaPredicted RBP12.09□□□□□ -0.47
CCDC47-206ENST00000584112 ZC3H10Q96K80 434 aaKnown RBP12.09□□□□□ -0.47
CCDC47-206ENST00000584112 TSPAN18Q96SJ8 248 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 BACH2Q9BYV9 841 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 ZHX3Q9H4I2 956 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 STK17AQ9UEE5 414 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 TBX20Q9UMR3 447 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 POLIQ9UNA4 740 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 LRRK2Q5S007 2527 aa12.09□□□□□ -0.47
CCDC47-206ENST00000584112 TTC26A0AVF1 554 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 DCLK1O15075 740 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 OGTO15294 1046 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 CCL16O15467 120 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 MEFVO15553 781 aaPredicted RBP12.08□□□□□ -0.48
CCDC47-206ENST00000584112 EXTL3O43909 919 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 CXCL8P10145 99 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 CYP3A5P20815 502 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 IGFBP6P24592 240 aaPredicted RBP12.08□□□□□ -0.48
CCDC47-206ENST00000584112 MCM4P33991 863 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 RDXP35241 583 aaKnown RBP12.08□□□□□ -0.48
CCDC47-206ENST00000584112 DDIT3P35638 169 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 CYP4F3Q08477 520 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 RESTQ13127 1097 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 PTPAQ15257 358 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 SEZ6Q53EL9 994 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 SLC8B1Q6J4K2 584 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 POTEHQ6S545 545 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 MARCH9Q86YJ5 346 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 KRI1Q8N9T8 703 aaKnown RBP12.08□□□□□ -0.48
CCDC47-206ENST00000584112 APPL2Q8NEU8 664 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 ZNF461Q8TAF7 563 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 LRRC15Q8TF66 581 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 ING5Q8WYH8 240 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 SUSD3Q96L08 255 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 ZSCAN16Q9H4T2 348 aaPredicted RBP12.08□□□□□ -0.48
CCDC47-206ENST00000584112 UBQLN1Q9UMX0 589 aaKnown RBP12.08□□□□□ -0.48
CCDC47-206ENST00000584112 SRPRBQ9Y5M8 271 aaKnown RBP12.08□□□□□ -0.48
CCDC47-206ENST00000584112 CLIC4Q9Y696 253 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 PI4KAP42356 2102 aa12.08□□□□□ -0.48
CCDC47-206ENST00000584112 NUP210Q8TEM1 1887 aaPredicted RBP12.08□□□□□ -0.48
CCDC47-206ENST00000584112 ENO4A6NNW6 628 aa12.07□□□□□ -0.48
CCDC47-206ENST00000584112 K7ELQ4 463 aaPredicted RBP12.07□□□□□ -0.48
CCDC47-206ENST00000584112 KHNYNO15037 678 aaKnown RBP12.07□□□□□ -0.48
CCDC47-206ENST00000584112 CCNE1P24864 410 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms