RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SPATA18Q8TC71 538 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 ZNF512Q96ME7 567 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 SEPT5Q99719 369 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 ACBD6Q9BR61 282 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 MKNK1Q9BUB5 465 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 MRPS23Q9Y3D9 190 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 GABRDO14764 452 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 IKBKBO14920 756 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 HCRTO43612 131 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 SOAT2O75908 522 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 STAU1O95793 577 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 CCNE1P24864 410 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 PCSK1P29120 753 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 PIK3CAP42336 1068 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 EPHB3P54753 998 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 FKBP3Q00688 224 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 SMARCB1Q12824 385 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 PTPN21Q16825 1174 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 ZACNQ401N2 412 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 INTS6LQ5JSJ4 861 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 C1orf220Q5T0J3 134 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 CLEC17AQ6ZS10 378 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 PDZD4Q76G19 769 aaPredicted RBP13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 SV2AQ7L0J3 742 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 ITFG1Q8TB96 612 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 FAM200AQ8TCP9 573 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 SPPL2BQ8TCT7 592 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 C2orf15Q8WU43 125 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 KBTBD7Q8WVZ9 684 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 ING5Q8WYH8 240 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 DHTKD1Q96HY7 919 aaPredicted RBP13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 C1QTNF1Q9BXJ1 281 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 XYLT2Q9H1B5 865 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 SNX25Q9H3E2 840 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 TMLHEQ9NVH6 421 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 CEP72Q9P209 647 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 CDH7Q9ULB5 785 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 CTNND2Q9UQB3 1225 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 PCDHB5Q9Y5E4 795 aa13.5□□□□□ -0.25
SMARCE1-218ENST00000582955 DOCK6Q96HP0 2047 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 FAM86C2PA6NEL3 165 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 VNN1O95497 513 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 HLA-DRAP01903 254 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 PDGFRBP09619 1106 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 MYL4P12829 197 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 BMP6P22004 513 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 WARSP23381 471 aaKnown RBP13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 LMO2P25791 158 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 GCLMP48507 274 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 TUFMP49411 452 aaKnown RBP13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 PSMC1P62191 440 aaKnown RBP13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 PPP3CAQ08209 521 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 NFE2Q16621 373 aaPredicted RBP13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 DCAF17Q5H9S7 520 aaPredicted RBP13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 ZNF667Q5HYK9 610 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 CYP4A22Q5TCH4 519 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 TCERG1LQ5VWI1 586 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 SCARA5Q6ZMJ2 495 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 LIMS2Q7Z4I7 341 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 HS6ST3Q8IZP7 471 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 OR6B3Q8NGW1 331 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 NELFBQ8WX92 580 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 FGF13Q92913 245 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 ELMO3Q96BJ8 720 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 SYT15Q9BQS2 421 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 MRPL45Q9BRJ2 306 aaKnown RBP13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 CLSTN2Q9H4D0 955 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■■■■ 149.1
SMARCE1-218ENST00000582955 ASAH2Q9NR71 780 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 KIAA1468Q9P260 1216 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 EPS15L1Q9UBC2 864 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 HSFX1Q9UBD0 423 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 GTF3C4Q9UKN8 822 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 SORCS3Q9UPU3 1222 aa13.49□□□□□ -0.25
SMARCE1-218ENST00000582955 BICDL2A1A5D9 508 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 PPP1R3GB7ZBB8 358 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 GOLGA6L22H0YM25 854 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 ZNF197O14709 1029 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 SLC16A3O15427 465 aaKnown RBP13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 ATP2C2O75185 946 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 TACC1O75410 805 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 GABBR2O75899 941 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 LAMP2P13473 410 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 P4HA1P13674 534 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 GNL1P36915 607 aaPredicted RBP13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 RAP1GAPP47736 663 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 ZXDAP98168 799 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 ENPEPQ07075 957 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 MTMR3Q13615 1198 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 VEPH1Q14D04 833 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 CCDC142Q17RM4 750 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 SLC5A9Q2M3M2 681 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 SGSM1Q2NKQ1 1148 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 ITIH5Q86UX2 942 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 SPATA2LQ8IUW3 424 aaPredicted RBP13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 NPAS3Q8IXF0 933 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 TRIML1Q8N9V2 468 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms