RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 MGAT5BQ3V5L5 792 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 TMEM119Q4V9L6 283 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 SLC39A12Q504Y0 691 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 C9orf57Q5W0N0 161 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 IL31Q6EBC2 164 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 PKN3Q6P5Z2 889 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 GAB3Q8WWW8 586 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 FAM212AQ96EL1 285 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 CDK5RAP3Q96JB5 506 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 GCNAQ96QF7 691 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 MSTO1Q9BUK6 570 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 SLC46A2Q9BY10 475 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 ZCWPW1Q9H0M4 648 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 ARRDC1-AS1Q9H2J1 176 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 ZMYM5Q9UJ78 669 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 CPSF3Q9UKF6 684 aaKnown RBP14.68□□□□□ -0.06
SS18-222ENST00000582792 DSEQ9UL01 958 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 ODF2LQ9ULJ1 636 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 ANO9A1A5B4 782 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 VWA3AA6NCI4 1184 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 PIRO00625 290 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 TM4SF5O14894 197 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 RPP40O75818 363 aaKnown RBP14.67□□□□□ -0.06
SS18-222ENST00000582792 EPN2O95208 641 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 NFICP08651 508 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 KCNA4P22459 653 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 RAP1GAPP47736 663 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 BECN1Q14457 450 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 TMEM132DQ14C87 1099 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 RILPL1Q5EBL4 403 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 TMEM196Q5HYL7 178 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 CACNA2D4Q7Z3S7 1137 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 CMTM8Q8IZV2 173 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 C12orf50Q8NA57 414 aaPredicted RBP14.67□□□□□ -0.06
SS18-222ENST00000582792 C2orf15Q8WU43 125 aaKnown RBP14.67□□□□□ -0.06
SS18-222ENST00000582792 FAM83CQ9BQN1 747 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 REEP2Q9BRK0 252 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 SMG9Q9H0W8 520 aaKnown RBP14.67□□□□□ -0.06
SS18-222ENST00000582792 GKN1Q9NS71 199 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 DERAQ9Y315 318 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 SPAG17Q6Q759 2223 aa14.67□□□□□ -0.06
SS18-222ENST00000582792 K7ENM7 598 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 ATG13O75143 517 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 PMLP29590 882 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 PXNP49023 591 aaPredicted RBP14.66□□□□□ -0.06
SS18-222ENST00000582792 ZNF131P52739 623 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 SMARCB1Q12824 385 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 GRSF1Q12849 480 aaKnown RBP eCLIP14.66□□□□□ -0.06
SS18-222ENST00000582792 RUNX3Q13761 415 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 CCDC6Q16204 474 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 TAF12Q16514 161 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 FSTL4Q6MZW2 842 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 SLC39A4Q6P5W5 647 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 KBTBD6Q86V97 674 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 SPPL2BQ8TCT7 592 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 GIPC2Q8TF65 315 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 CHFRQ96EP1 664 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 ASB7Q9H672 318 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 HPS4Q9NQG7 708 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 RXFP3Q9NSD7 469 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 ANGPTL2Q9UKU9 493 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 SLC8A2Q9UPR5 921 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 SDK1Q7Z5N4 2213 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 SCN1AP35498 2009 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 DENND4CQ5VZ89 1909 aa14.66□□□□□ -0.06
SS18-222ENST00000582792 CYB561D2O14569 222 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 TRDMT1O14717 391 aaKnown RBP14.65□□□□□ -0.06
SS18-222ENST00000582792 AKAP3O75969 853 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 CCDC192P0DO97 292 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 HAPLN1P10915 354 aaPredicted RBP14.65□□□□□ -0.06
SS18-222ENST00000582792 AVPR1AP37288 418 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 CDR1P51861 262 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 PLA2G2CQ5R387 149 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 N4BP2L1Q5TBK1 243 aaPredicted RBP14.65□□□□□ -0.06
SS18-222ENST00000582792 LARP1BQ659C4 914 aaKnown RBP14.65□□□□□ -0.06
SS18-222ENST00000582792 ARL6IP4Q66PJ3 421 aaKnown RBP14.65□□□□□ -0.06
SS18-222ENST00000582792 TMEM150AQ86TG1 271 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 LRRTM3Q86VH5 581 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 GPBP1Q86WP2 473 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 METTL23Q86XA0 190 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 THEM5Q8N1Q8 247 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 MYCT1Q8N699 235 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 ZC3H10Q96K80 434 aaKnown RBP14.65□□□□□ -0.06
SS18-222ENST00000582792 EBF3Q9H4W6 596 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 PARVGQ9HBI0 331 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 CCL26Q9Y258 94 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 C2CD2Q9Y426 696 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 PCDHGA5Q9Y5G8 931 aa14.65□□□□□ -0.06
SS18-222ENST00000582792 EML5Q05BV3 1969 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 OTOL1A6NHN0 477 aaPredicted RBP14.64□□□□□ -0.07
SS18-222ENST00000582792 H3BQV1 296 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 ZZEF1O43149 2961 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 SLC26A4O43511 780 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 TRAK2O60296 914 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 FAM13AO94988 1023 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 F11P03951 625 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 DDX6P26196 483 aaKnown RBP eCLIP14.64□□□□□ -0.07
SS18-222ENST00000582792 ABCD1P33897 745 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 TAF6P49848 677 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 NLRP12P59046 1061 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms