RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 DNM3Q9UQ16 869 aa13.83□□□□□ -0.2
SS18-219ENST00000581570 CCL26Q9Y258 94 aa13.83□□□□□ -0.2
SS18-219ENST00000581570 INVSQ9Y283 1065 aa13.83□□□□□ -0.2
SS18-219ENST00000581570 TTC26A0AVF1 554 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 E9PMD0 336 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 CDX4O14627 284 aaPredicted RBP13.82□□□□□ -0.2
SS18-219ENST00000581570 XPOTO43592 962 aaKnown RBP13.82□□□□□ -0.2
SS18-219ENST00000581570 JAK2O60674 1132 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 ODC1P11926 461 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 ATF6P18850 670 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 U2AF2P26368 475 aaKnown RBP eCLIP13.82□□□□□ -0.21e-7■■■□□ 18.2
SS18-219ENST00000581570 GUCY2FP51841 1108 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 CDR1P51861 262 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 MCL1Q07820 350 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 MAPK7Q13164 816 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 SAFBQ15424 915 aaKnown RBP eCLIP13.82□□□□□ -0.2
SS18-219ENST00000581570 UAP1L1Q3KQV9 507 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 SLC39A12Q504Y0 691 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 USP39Q53GS9 565 aaKnown RBP13.82□□□□□ -0.2
SS18-219ENST00000581570 PMS2CLQ68D20 193 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 C11orf74Q86VG3 221 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 MAB21L3Q8N8X9 362 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 DEFB124Q8NES8 71 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 USP13Q92995 863 aaPredicted RBP13.82□□□□□ -0.2
SS18-219ENST00000581570 GTF3C6Q969F1 213 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 ACDQ96AP0 544 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 SENP8Q96LD8 212 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 NTPCRQ9BSD7 190 aaKnown RBP13.82□□□□□ -0.2
SS18-219ENST00000581570 RUSC1Q9BVN2 902 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 TDP1Q9NUW8 608 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 STK24Q9Y6E0 443 aa13.82□□□□□ -0.2
SS18-219ENST00000581570 LACTBL1A8MY62 500 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 PATE3B3GLJ2 98 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 PPEF2O14830 753 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 DDX6P26196 483 aaKnown RBP eCLIP13.81□□□□□ -0.2
SS18-219ENST00000581570 GJA4P35212 333 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 LILRA4P59901 499 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 GUCY1B3Q02153 619 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 PPP2R3AQ06190 1150 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 PSMD2Q13200 908 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 PDGFRLQ15198 375 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 ME3Q16798 604 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 NAIF1Q69YI7 327 aaPredicted RBP13.81□□□□□ -0.2
SS18-219ENST00000581570 RINT1Q6NUQ1 792 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 ZPBP2Q6X784 338 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 C1orf186Q6ZWK4 172 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 CYP2U1Q7Z449 544 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 OR10T2Q8NGX3 314 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 SNX29Q8TEQ0 813 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 SPIRE2Q8WWL2 714 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 KIF9Q9HAQ2 790 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 KCNG1Q9UIX4 513 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 TBX20Q9UMR3 447 aa13.81□□□□□ -0.2
SS18-219ENST00000581570 SPEGQ15772 3267 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 F11P03951 625 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 PAX3P23760 479 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 TNFSF9P41273 254 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 SMTNP53814 917 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 NLRP12P59046 1061 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 IRX4P78413 519 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 PDIA5Q14554 519 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 TTC38Q5R3I4 469 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 SPATA1Q5VX52 437 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 TXNDC8Q6A555 127 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 KIAA1211LQ6NV74 962 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 TMEM150AQ86TG1 271 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 CPA6Q8N4T0 437 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 C4orf32Q8N8J7 132 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 TMEM161BQ8NDZ6 487 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 TSTD1Q8NFU3 115 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 RIN3Q8TB24 985 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 EZH1Q92800 747 aaPredicted RBP13.8□□□□□ -0.2
SS18-219ENST00000581570 CD101Q93033 1021 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 TPSD1Q9BZJ3 242 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 HAPLN2Q9GZV7 340 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 ZCWPW1Q9H0M4 648 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 ECT2Q9H8V3 914 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 NEUROG3Q9Y4Z2 214 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 SPAG17Q6Q759 2223 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 ASPMQ8IZT6 3477 aa13.8□□□□□ -0.2
SS18-219ENST00000581570 NUP210Q8TEM1 1887 aaPredicted RBP13.79□□□□□ -0.2
SS18-219ENST00000581570 HYAL3O43820 417 aaPredicted RBP13.79□□□□□ -0.2
SS18-219ENST00000581570 CYP11A1P05108 521 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 MAPTP10636 758 aaKnown RBP13.79□□□□□ -0.2
SS18-219ENST00000581570 HAPLN1P10915 354 aaPredicted RBP13.79□□□□□ -0.2
SS18-219ENST00000581570 NMT1P30419 496 aaKnown RBP13.79□□□□□ -0.2
SS18-219ENST00000581570 DHPSP49366 369 aaPredicted RBP13.79□□□□□ -0.2
SS18-219ENST00000581570 SMARCB1Q12824 385 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 MON1AQ86VX9 555 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 METTL23Q86XA0 190 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 THEM5Q8N1Q8 247 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 SPPL2BQ8TCT7 592 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 C2orf15Q8WU43 125 aaKnown RBP13.79□□□□□ -0.2
SS18-219ENST00000581570 PIGKQ92643 395 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 MRPS31Q92665 395 aaKnown RBP13.79□□□□□ -0.2
SS18-219ENST00000581570 BICD1Q96G01 975 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 TSPAN18Q96SJ8 248 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 TIPINQ9BVW5 301 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 RAB34Q9BZG1 259 aa13.79□□□□□ -0.2
SS18-219ENST00000581570 SLC32A1Q9H598 525 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms