RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 WSCD1Q658N2 575 aa26.72■■□□□ 1.87
CDC42EP4-205ENST00000580315 MTSS1LQ765P7 747 aa26.72■■□□□ 1.87
CDC42EP4-205ENST00000580315 SLC9A9Q8IVB4 645 aa26.72■■□□□ 1.87
CDC42EP4-205ENST00000580315 ELMOD1Q8N336 334 aa26.72■■□□□ 1.87
CDC42EP4-205ENST00000580315 CXorf38Q8TB03 319 aa26.72■■□□□ 1.87
CDC42EP4-205ENST00000580315 TMEM174Q8WUU8 243 aa26.72■■□□□ 1.87
CDC42EP4-205ENST00000580315 FAM84AQ96KN4 292 aa26.72■■□□□ 1.87
CDC42EP4-205ENST00000580315 CHMP5Q9NZZ3 219 aa26.72■■□□□ 1.87
CDC42EP4-205ENST00000580315 PTPRJQ12913 1337 aa26.71■■□□□ 1.87
CDC42EP4-205ENST00000580315 LRRN2O75325 713 aa26.71■■□□□ 1.87
CDC42EP4-205ENST00000580315 SMC2O95347 1197 aa26.71■■□□□ 1.87
CDC42EP4-205ENST00000580315 PNOCQ13519 176 aa26.71■■□□□ 1.87
CDC42EP4-205ENST00000580315 PABPC1LQ4VXU2 614 aaKnown RBP26.71■■□□□ 1.87
CDC42EP4-205ENST00000580315 ZC3H14Q6PJT7 736 aaKnown RBP26.71■■□□□ 1.87
CDC42EP4-205ENST00000580315 TIGD1Q96MW7 591 aa26.71■■□□□ 1.87
CDC42EP4-205ENST00000580315 HCFC1R1Q9NWW0 138 aa26.71■■□□□ 1.87
CDC42EP4-205ENST00000580315 SIX4Q9UIU6 781 aa26.71■■□□□ 1.87
CDC42EP4-205ENST00000580315 NR3C1P04150 777 aa26.7■■□□□ 1.86
CDC42EP4-205ENST00000580315 PTPN2P17706 415 aa26.7■■□□□ 1.86
CDC42EP4-205ENST00000580315 PLD1Q13393 1074 aa26.7■■□□□ 1.86
CDC42EP4-205ENST00000580315 TRAPPC11Q7Z392 1133 aa26.7■■□□□ 1.86
CDC42EP4-205ENST00000580315 TMEM86AQ8N2M4 240 aa26.7■■□□□ 1.86
CDC42EP4-205ENST00000580315 GUF1Q8N442 669 aaKnown RBP26.7■■□□□ 1.86
CDC42EP4-205ENST00000580315 PGLYRP2Q96PD5 576 aa26.7■■□□□ 1.86
CDC42EP4-205ENST00000580315 DDX23Q9BUQ8 820 aaKnown RBP26.7■■□□□ 1.86
CDC42EP4-205ENST00000580315 DMAC2Q9NW81 257 aa26.7■■□□□ 1.86
CDC42EP4-205ENST00000580315 GDAP2Q9NXN4 497 aa26.7■■□□□ 1.86
CDC42EP4-205ENST00000580315 DNMT3BQ9UBC3 853 aaKnown RBP26.7■■□□□ 1.86
CDC42EP4-205ENST00000580315 SNX9Q9Y5X1 595 aa26.7■■□□□ 1.86
CDC42EP4-205ENST00000580315 KANSL1LA0AUZ9 987 aa26.69■■□□□ 1.86
CDC42EP4-205ENST00000580315 IQCEQ6IPM2 695 aa26.69■■□□□ 1.86
CDC42EP4-205ENST00000580315 MAML2Q8IZL2 1156 aaPredicted RBP26.69■■□□□ 1.86
CDC42EP4-205ENST00000580315 OR10T2Q8NGX3 314 aa26.69■■□□□ 1.86
CDC42EP4-205ENST00000580315 HPDLQ96IR7 371 aa26.69■■□□□ 1.86
CDC42EP4-205ENST00000580315 MAPK8IP1Q9UQF2 711 aa26.69■■□□□ 1.86
CDC42EP4-205ENST00000580315 TRAF3IP3Q9Y228 551 aa26.69■■□□□ 1.86
CDC42EP4-205ENST00000580315 FRMD4BQ9Y2L6 1034 aa26.69■■□□□ 1.86
CDC42EP4-205ENST00000580315 CACNA1IQ9P0X4 2223 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 AP3M2P53677 418 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 TWF1Q12792 350 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 SMARCB1Q12824 385 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 MLF2Q15773 248 aaPredicted RBP26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 SLC44A4Q53GD3 710 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 NPAS3Q8IXF0 933 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 DCP1BQ8IZD4 617 aaKnown RBP26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 PDCL2Q8N4E4 241 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 TOP6BLQ8N6T0 577 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 SPATA18Q8TC71 538 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 ZNF512Q96ME7 567 aaPredicted RBP26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 GSDMAQ96QA5 445 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 KXD1Q9BQD3 176 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 ZCWPW1Q9H0M4 648 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 L1RE1Q9UN81 338 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 YIPF1Q9Y548 306 aa26.68■■□□□ 1.86
CDC42EP4-205ENST00000580315 OTOGLQ3ZCN5 2332 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 MTMR11A4FU01 709 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 KINO60870 393 aaKnown RBP26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 RHOP08100 348 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 MYL7Q01449 175 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 TSPY1Q01534 308 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 PRKCQQ04759 706 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 DUSP4Q13115 394 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 SLC39A12Q504Y0 691 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 CENPPQ6IPU0 288 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 SMARCE1Q969G3 411 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 TMEM209Q96SK2 561 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 CORO1BQ9BR76 489 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 GTPBP4Q9BZE4 634 aaKnown RBP26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 AVENQ9NQS1 362 aaPredicted RBP26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 HSFX1Q9UBD0 423 aa26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 MRPS23Q9Y3D9 190 aaKnown RBP26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 MTF2Q9Y483 593 aaPredicted RBP26.67■■□□□ 1.86
CDC42EP4-205ENST00000580315 RPL13P26373 211 aaKnown RBP26.66■■□□□ 1.86
CDC42EP4-205ENST00000580315 ALDH1A3P47895 512 aa26.66■■□□□ 1.86
CDC42EP4-205ENST00000580315 PFKPQ01813 784 aa26.66■■□□□ 1.86
CDC42EP4-205ENST00000580315 TRPC3Q13507 836 aa26.66■■□□□ 1.86
CDC42EP4-205ENST00000580315 CEP135Q66GS9 1140 aa26.66■■□□□ 1.86
CDC42EP4-205ENST00000580315 DPH6Q7L8W6 267 aa26.66■■□□□ 1.86
CDC42EP4-205ENST00000580315 KIAA2013Q8IYS2 634 aa26.66■■□□□ 1.86
CDC42EP4-205ENST00000580315 ATAD1Q8NBU5 361 aa26.66■■□□□ 1.86
CDC42EP4-205ENST00000580315 C2orf15Q8WU43 125 aaKnown RBP26.66■■□□□ 1.86
CDC42EP4-205ENST00000580315 BCO2Q9BYV7 579 aa26.66■■□□□ 1.86
CDC42EP4-205ENST00000580315 PHACTR2O75167 634 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 VNN2O95498 520 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 NR2F2P24468 414 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 LHX1P48742 406 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 EPHB3P54753 998 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 NFIL3Q16649 462 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 CYP4A22Q5TCH4 519 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 SCARA3Q6AZY7 606 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 ELOA2Q8IYF1 753 aaPredicted RBP26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 ADGRF2Q8IZF7 708 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 LEMD2Q8NC56 503 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 PARD3BQ8TEW8 1205 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 ING5Q8WYH8 240 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 RMDN1Q96DB5 314 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 DDX43Q9NXZ2 648 aaKnown RBP26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 COL4A3Q01955 1670 aa26.65■■□□□ 1.86
CDC42EP4-205ENST00000580315 FAM170BA6NMN3 283 aa26.64■■□□□ 1.86
CDC42EP4-205ENST00000580315 ZNF197O14709 1029 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms