RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 SCNM1Q9BWG6 230 aa21.02■□□□□ 0.96
LIMD2-209ENST00000580222 GPR88Q9GZN0 384 aa21.02■□□□□ 0.96
LIMD2-209ENST00000580222 HPSEQ9Y251 543 aa21.02■□□□□ 0.96
LIMD2-209ENST00000580222 SMG1Q96Q15 3661 aaKnown RBP21.02■□□□□ 0.96
LIMD2-209ENST00000580222 LOC400499M0QZD8 3231 aa21.02■□□□□ 0.95
LIMD2-209ENST00000580222 CCDC163A0A0D9SF12 145 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 FAM237AA0A1B0GTK4 181 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 PRAMEF12O95522 483 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 OR4Q2P0C623 313 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 SYKP43405 635 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 NDUFA8P51970 172 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 UBE2HP62256 183 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 MCM6Q14566 821 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 FSTL4Q6MZW2 842 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 PADI6Q6TGC4 694 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 IQUBQ8NA54 791 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 MCPH1Q8NEM0 835 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 FAM200AQ8TCP9 573 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 CUEDC2Q9H467 287 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 LHX6Q9UPM6 363 aa21.01■□□□□ 0.95
LIMD2-209ENST00000580222 SLC12A3P55017 1021 aa21■□□□□ 0.95
LIMD2-209ENST00000580222 E2F4Q16254 413 aa21■□□□□ 0.95
LIMD2-209ENST00000580222 SYT2Q8N9I0 419 aaPredicted RBP21■□□□□ 0.95
LIMD2-209ENST00000580222 BEST2Q8NFU1 509 aa21■□□□□ 0.95
LIMD2-209ENST00000580222 DEPTORQ8TB45 409 aa21■□□□□ 0.95
LIMD2-209ENST00000580222 DDX12PQ92771 950 aa21■□□□□ 0.95
LIMD2-209ENST00000580222 SUSD3Q96L08 255 aa21■□□□□ 0.95
LIMD2-209ENST00000580222 PGLYRP2Q96PD5 576 aa21■□□□□ 0.95
LIMD2-209ENST00000580222 FBRSL1Q9HCM7 1045 aaKnown RBP21■□□□□ 0.95
LIMD2-209ENST00000580222 OTOL1A6NHN0 477 aaPredicted RBP20.99■□□□□ 0.95
LIMD2-209ENST00000580222 SOBPA7XYQ1 873 aa20.99■□□□□ 0.95
LIMD2-209ENST00000580222 GRM5P41594 1212 aa20.99■□□□□ 0.95
LIMD2-209ENST00000580222 NAMPTP43490 491 aa20.99■□□□□ 0.95
LIMD2-209ENST00000580222 ARHGAP29Q52LW3 1261 aa20.99■□□□□ 0.95
LIMD2-209ENST00000580222 SV2BQ7L1I2 683 aa20.99■□□□□ 0.95
LIMD2-209ENST00000580222 GPBP1Q86WP2 473 aa20.99■□□□□ 0.95
LIMD2-209ENST00000580222 CEP57L1Q8IYX8 460 aa20.99■□□□□ 0.95
LIMD2-209ENST00000580222 TMEM209Q96SK2 561 aa20.99■□□□□ 0.95
LIMD2-209ENST00000580222 SMG9Q9H0W8 520 aaKnown RBP20.99■□□□□ 0.95
LIMD2-209ENST00000580222 CDT1Q9H211 546 aa20.99■□□□□ 0.95
LIMD2-209ENST00000580222 SERTAD1Q9UHV2 236 aa20.99■□□□□ 0.95
LIMD2-209ENST00000580222 NUB1Q9Y5A7 615 aa20.99■□□□□ 0.95
LIMD2-209ENST00000580222 TIMM13Q9Y5L4 95 aaPredicted RBP20.99■□□□□ 0.95
LIMD2-209ENST00000580222 LNP1A1A4G5 178 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 SOAT2O75908 522 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 AKAP3O75969 853 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 CPB1P15086 417 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 CYP11B2P19099 503 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 DUSP4Q13115 394 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 TMEM196Q5HYL7 178 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 NAIF1Q69YI7 327 aaPredicted RBP20.98■□□□□ 0.95
LIMD2-209ENST00000580222 ZNF280DQ6N043 979 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 TTC9BQ8N6N2 239 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 HHIPQ96QV1 700 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 RUSC1Q9BVN2 902 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 MAGEF1Q9HAY2 307 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 PTPRHQ9HD43 1115 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 USP25Q9UHP3 1055 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 MAFFQ9ULX9 164 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 SLC8A2Q9UPR5 921 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 SLC27A5Q9Y2P5 690 aa20.98■□□□□ 0.95
LIMD2-209ENST00000580222 BCLAF3A2AJT9 711 aaKnown RBP20.97■□□□□ 0.95
LIMD2-209ENST00000580222 TMEM8BA6NDV4 472 aa20.97■□□□□ 0.95
LIMD2-209ENST00000580222 CDX4O14627 284 aaPredicted RBP20.97■□□□□ 0.95
LIMD2-209ENST00000580222 CAVIN2O95810 425 aa20.97■□□□□ 0.95
LIMD2-209ENST00000580222 KRT18P05783 430 aaKnown RBP20.97■□□□□ 0.95
LIMD2-209ENST00000580222 KCNE1P15382 129 aa20.97■□□□□ 0.95
LIMD2-209ENST00000580222 CREB5Q02930 508 aa20.97■□□□□ 0.95
LIMD2-209ENST00000580222 FAM160A1Q05DH4 1040 aa20.97■□□□□ 0.95
LIMD2-209ENST00000580222 RINT1Q6NUQ1 792 aa20.97■□□□□ 0.95
LIMD2-209ENST00000580222 KIAA1211LQ6NV74 962 aa20.97■□□□□ 0.95
LIMD2-209ENST00000580222 ZCCHC14Q8WYQ9 949 aaKnown RBP20.97■□□□□ 0.95
LIMD2-209ENST00000580222 LMBRD1Q9NUN5 540 aa20.97■□□□□ 0.95
LIMD2-209ENST00000580222 KCND2Q9NZV8 630 aa20.97■□□□□ 0.95
LIMD2-209ENST00000580222 TNFSF13BQ9Y275 285 aa20.97■□□□□ 0.95
LIMD2-209ENST00000580222 INVSQ9Y283 1065 aa20.97■□□□□ 0.95
LIMD2-209ENST00000580222 ACTN4O43707 911 aaKnown RBP20.96■□□□□ 0.95
LIMD2-209ENST00000580222 ZNF202O95125 648 aa20.96■□□□□ 0.95
LIMD2-209ENST00000580222 EGFP01133 1207 aa20.96■□□□□ 0.95
LIMD2-209ENST00000580222 ITPRIPL2Q3MIP1 535 aa20.96■□□□□ 0.95
LIMD2-209ENST00000580222 GPR158Q5T848 1215 aa20.96■□□□□ 0.95
LIMD2-209ENST00000580222 DNAJB7Q7Z6W7 309 aaPredicted RBP20.96■□□□□ 0.95
LIMD2-209ENST00000580222 ACO2Q99798 780 aaKnown RBP20.96■□□□□ 0.95
LIMD2-209ENST00000580222 TNMDQ9H2S6 317 aa20.96■□□□□ 0.95
LIMD2-209ENST00000580222 ATXN3LQ9H3M9 355 aa20.96■□□□□ 0.95
LIMD2-209ENST00000580222 HPS4Q9NQG7 708 aa20.96■□□□□ 0.95
LIMD2-209ENST00000580222 GKN1Q9NS71 199 aa20.96■□□□□ 0.95
LIMD2-209ENST00000580222 SLC38A7Q9NVC3 462 aa20.96■□□□□ 0.95
LIMD2-209ENST00000580222 PCDHB8Q9UN66 801 aa20.96■□□□□ 0.95
LIMD2-209ENST00000580222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.95■□□□□ 0.94
LIMD2-209ENST00000580222 PATE3B3GLJ2 98 aa20.95■□□□□ 0.94
LIMD2-209ENST00000580222 TAF4O00268 1085 aa20.95■□□□□ 0.94
LIMD2-209ENST00000580222 DPYSL4O14531 572 aa20.95■□□□□ 0.94
LIMD2-209ENST00000580222 RNF40O75150 1001 aa20.95■□□□□ 0.94
LIMD2-209ENST00000580222 SLFN14P0C7P3 912 aa20.95■□□□□ 0.94
LIMD2-209ENST00000580222 RPL9P32969 192 aaKnown RBP20.95■□□□□ 0.94
LIMD2-209ENST00000580222 MCM4P33991 863 aa20.95■□□□□ 0.94
LIMD2-209ENST00000580222 CDR1P51861 262 aa20.95■□□□□ 0.94
LIMD2-209ENST00000580222 YARSP54577 528 aaKnown RBP20.95■□□□□ 0.94
LIMD2-209ENST00000580222 RAD51AP2Q09MP3 1159 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms