RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 SV2AQ7L0J3 742 aa20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 DPH6Q7L8W6 267 aa20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 DCP1BQ8IZD4 617 aaKnown RBP20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 EDAQ92838 391 aa20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 FGF13Q92913 245 aa20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 TCEAL4Q96EI5 215 aa20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 ZNF512Q96ME7 567 aaPredicted RBP20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 PKMYT1Q99640 499 aa20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 SEPT5Q99719 369 aaPredicted RBP20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 ABI2Q9NYB9 513 aaPredicted RBP20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.01■□□□□ 0.795e-13■■□□□ 11.6
PPP4R1-215ENST00000580182 EPS15L1Q9UBC2 864 aa20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 NXF1Q9UBU9 619 aaKnown RBP20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 GTF3C4Q9UKN8 822 aa20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 NME7Q9Y5B8 376 aa20.01■□□□□ 0.79
PPP4R1-215ENST00000580182 PPP1R3GB7ZBB8 358 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 IKBKBO14920 756 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 CETN3O15182 167 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 ATP2C2O75185 946 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 STAU1O95793 577 aaKnown RBP20■□□□□ 0.79
PPP4R1-215ENST00000580182 PDGFRBP09619 1106 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 KRT13P13646 458 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 ATICP31939 592 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 CCR2P41597 374 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 GCLMP48507 274 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 LHX1P48742 406 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 TNNC1P63316 161 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 TSPY1Q01534 308 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 PPP3CAQ08209 521 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 MGAT5BQ3V5L5 792 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 INTS6LQ5JSJ4 861 aaKnown RBP20■□□□□ 0.79
PPP4R1-215ENST00000580182 INTS8Q75QN2 995 aaKnown RBP20■□□□□ 0.79
PPP4R1-215ENST00000580182 SYAP1Q96A49 352 aaPredicted RBP20■□□□□ 0.79
PPP4R1-215ENST00000580182 TSG101Q99816 390 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 C1QTNF1Q9BXJ1 281 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 MMRN2Q9H8L6 949 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 KCNK12Q9HB15 430 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 CDH7Q9ULB5 785 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 MRPS23Q9Y3D9 190 aaKnown RBP20■□□□□ 0.79
PPP4R1-215ENST00000580182 TRIOO75962 3097 aa20■□□□□ 0.79
PPP4R1-215ENST00000580182 MYBPHLA2RUH7 354 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 CEBPBP17676 345 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 WARSP23381 471 aaKnown RBP19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 CCNE1P24864 410 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 ALDH1A3P47895 512 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 PSMC1P62191 440 aaKnown RBP19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 ZNF699Q32M78 642 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 PRSS36Q5K4E3 855 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 KLHL10Q6JEL2 608 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 ZC3H3Q8IXZ2 948 aaKnown RBP19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 ELMOD1Q8N336 334 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 SPATA18Q8TC71 538 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 DHTKD1Q96HY7 919 aaPredicted RBP19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 LPIN3Q9BQK8 851 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 PI4K2AQ9BTU6 479 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 GTPBP4Q9BZE4 634 aaKnown RBP19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.99■□□□□ 0.794e-10■■■■■ 39.2
PPP4R1-215ENST00000580182 LMBRD1Q9NUN5 540 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 SORCS3Q9UPU3 1222 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 PCDHB5Q9Y5E4 795 aa19.99■□□□□ 0.79
PPP4R1-215ENST00000580182 PSMA7O14818 248 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 LRRN2O75325 713 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 CLSTN1O94985 981 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 HLA-DRAP01903 254 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 HAPLN1P10915 354 aaPredicted RBP19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 EPB41P11171 864 aaKnown RBP19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 MYL4P12829 197 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 GJA1P17302 382 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 ATF6P18850 670 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 RAP1GAPP47736 663 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 GPR15P49685 360 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 EPHB3P54753 998 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 CDH8P55286 799 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 FKBP3Q00688 224 aaKnown RBP19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 STIM1Q13586 685 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 IQCEQ6IPM2 695 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 SPOPLQ6IQ16 392 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 SCARA5Q6ZMJ2 495 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 NPAS3Q8IXF0 933 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 OR6B3Q8NGW1 331 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 SPPL2BQ8TCT7 592 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 GPR152Q8TDT2 470 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 C2orf15Q8WU43 125 aaKnown RBP19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 MCRS1Q96EZ8 462 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 DUSP9Q99956 384 aaKnown RBP19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 SYT15Q9BQS2 421 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 MKNK1Q9BUB5 465 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 LRRC3Q9BY71 257 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 SMYD3Q9H7B4 428 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 VRTNQ9H8Y1 702 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 CRTAC1Q9NQ79 661 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 AVENQ9NQS1 362 aaPredicted RBP19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 KIAA1468Q9P260 1216 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 HSFX1Q9UBD0 423 aa19.98■□□□□ 0.79
PPP4R1-215ENST00000580182 GPR37L1O60883 481 aa19.97■□□□□ 0.79
PPP4R1-215ENST00000580182 TACC1O75410 805 aa19.97■□□□□ 0.79
PPP4R1-215ENST00000580182 MOSPD3O75425 235 aa19.97■□□□□ 0.79
PPP4R1-215ENST00000580182 PCSK1P29120 753 aa19.97■□□□□ 0.79
PPP4R1-215ENST00000580182 GNL1P36915 607 aaPredicted RBP19.97■□□□□ 0.79
PPP4R1-215ENST00000580182 TUFMP49411 452 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms