RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 NME3Q13232 169 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 EMC2Q15006 297 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 CLEC16AQ2KHT3 1053 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 RARS2Q5T160 578 aaKnown RBP14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 EMC1Q8N766 993 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 TCP10LQ8TDR4 215 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 WRNIP1Q96S55 665 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 XAB2Q9HCS7 855 aaKnown RBP14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 CACNA1FO60840 1977 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 GRIN2DO15399 1336 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 RNF103-CHMP3A0A140T963 221 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 PIK3CDO00329 1044 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 PYGBP11216 843 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 SERPINB3P29508 390 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 STRIP1Q5VSL9 837 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 OLFML2BQ68BL8 750 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 BZW1Q7L1Q6 419 aaKnown RBP14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 OTOP1Q7RTM1 612 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 LRRC6Q86X45 466 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 CENPTQ96BT3 561 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 SDCCAG3Q96C92 435 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 TMA16Q96EY4 203 aaKnown RBP14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 GGA2Q9UJY4 613 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 MON2Q7Z3U7 1717 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 ADRA1DP25100 572 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 GCLCP48506 637 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 ACTR2P61160 394 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 BMPR2Q13873 1038 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 RASA2Q15283 850 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 XKR3Q5GH77 459 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 CDKL3Q8IVW4 592 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 MCOLN2Q8IZK6 566 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 ACTL9Q8TC94 416 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 CCDC138Q96M89 665 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 TIPINQ9BVW5 301 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 TMEM39BQ9GZU3 492 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 DNPEPQ9ULA0 475 aa14.23□□□□□ -0.13
TRAPPC8-207ENST00000580104 ZBBXA8MT70 800 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 A8MUI8 341 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 PPP1R12AO14974 1030 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 EXTL3O43909 919 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 SEC24DO94855 1032 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 ACADSP16219 412 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 ZNF677Q86XU0 584 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 ZFPM1Q8IX07 1006 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 CKAP2Q8WWK9 683 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 BFARQ9NZS9 450 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 ZNF711Q9Y462 761 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 ENTPD5O75356 428 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 LCP1P13796 627 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 AQP5P55064 265 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 TKFCQ3LXA3 575 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 ARSHQ5FYA8 562 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 TFDP3Q5H9I0 405 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 RSBN1LQ6PCB5 846 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 EPS8L1Q8TE68 723 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 FAM96AQ9H5X1 160 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 PRKCBP05771 671 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 RPA3P35244 121 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 MORF4L2Q15014 288 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 IZUMO2Q6UXV1 221 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 KDELC2Q7Z4H8 507 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 ZSWIM2Q8NEG5 633 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 FAM84AQ96KN4 292 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 MOV10L1Q9BXT6 1211 aaKnown RBP14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 PPCSQ9HAB8 311 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 IGSF9BQ9UPX0 1349 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 MAGEA13PA6NCF6 341 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 ETS1P14921 441 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 HMGCS2P54868 508 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 PRAMEP78395 509 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 TTC39BQ5VTQ0 682 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 BCL9O00512 1426 aa14.22□□□□□ -0.13
TRAPPC8-207ENST00000580104 RBAK-RBAKDNI3L0D1 243 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 GNGT2O14610 69 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 FASTKD1Q53R41 847 aaKnown RBP14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 TEX2Q8IWB9 1127 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 STK32AQ8WU08 396 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 KIAA1683Q9H0B3 1180 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 AGAP1Q9UPQ3 857 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 NOD1Q9Y239 953 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 SH3BP5O60239 455 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 HNRNPCP07910 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 NUDT17P0C025 328 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 SGSM1Q2NKQ1 1148 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 FAM47CQ5HY64 1035 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 MFSD7Q6UXD7 560 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 ISLR2Q6UXK2 745 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 SPOCD1Q6ZMY3 1216 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 SCUBE1Q8IWY4 988 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 NFIBO00712 420 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 LCA5LO95447 670 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 GH1P01241 217 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 SOX11P35716 441 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 STAT5BP51692 787 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 DSG1Q02413 1049 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 EXD1Q8NHP7 514 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 KCNMB3Q9NPA1 279 aa14.21□□□□□ -0.13
TRAPPC8-207ENST00000580104 FAM49BQ9NUQ9 324 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms