RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 SLC26A4O43511 780 aa22.69■■□□□ 1.22
TSEN54-205ENST00000578415 GTF2BQ00403 316 aa22.69■■□□□ 1.22
TSEN54-205ENST00000578415 WSCD1Q658N2 575 aa22.69■■□□□ 1.22
TSEN54-205ENST00000578415 CMTM8Q8IZV2 173 aa22.69■■□□□ 1.22
TSEN54-205ENST00000578415 GCNAQ96QF7 691 aa22.69■■□□□ 1.22
TSEN54-205ENST00000578415 FAM83CQ9BQN1 747 aa22.69■■□□□ 1.22
TSEN54-205ENST00000578415 PYM1Q9BRP8 204 aaKnown RBP22.69■■□□□ 1.22
TSEN54-205ENST00000578415 ASB7Q9H672 318 aa22.69■■□□□ 1.22
TSEN54-205ENST00000578415 HPS4Q9NQG7 708 aa22.69■■□□□ 1.22
TSEN54-205ENST00000578415 GKN1Q9NS71 199 aa22.69■■□□□ 1.22
TSEN54-205ENST00000578415 THG1LQ9NWX6 298 aaKnown RBP22.69■■□□□ 1.22
TSEN54-205ENST00000578415 C2CD2Q9Y426 696 aa22.69■■□□□ 1.22
TSEN54-205ENST00000578415 CHD8Q9HCK8 2581 aa22.68■■□□□ 1.22
TSEN54-205ENST00000578415 OTOL1A6NHN0 477 aaPredicted RBP22.68■■□□□ 1.22
TSEN54-205ENST00000578415 FOXD2O60548 495 aaPredicted RBP22.68■■□□□ 1.22
TSEN54-205ENST00000578415 HAPLN1P10915 354 aaPredicted RBP22.68■■□□□ 1.22
TSEN54-205ENST00000578415 NMT1P30419 496 aaKnown RBP22.68■■□□□ 1.22
TSEN54-205ENST00000578415 MCM6Q14566 821 aa22.68■■□□□ 1.22
TSEN54-205ENST00000578415 TMEM196Q5HYL7 178 aa22.68■■□□□ 1.22
TSEN54-205ENST00000578415 SPPL2BQ8TCT7 592 aa22.68■■□□□ 1.22
TSEN54-205ENST00000578415 CCL26Q9Y258 94 aa22.68■■□□□ 1.22
TSEN54-205ENST00000578415 HMGA1P17096 107 aaKnown RBP22.67■■□□□ 1.22
TSEN54-205ENST00000578415 PLCG1P19174 1290 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 UBA7P41226 1012 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 PXNP49023 591 aaPredicted RBP22.67■■□□□ 1.22
TSEN54-205ENST00000578415 TAF6P49848 677 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 SMARCB1Q12824 385 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 ZC2HC1CQ53FD0 456 aaPredicted RBP22.67■■□□□ 1.22
TSEN54-205ENST00000578415 TRIM68Q6AZZ1 485 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 FSTL4Q6MZW2 842 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 METTL23Q86XA0 190 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 RIN3Q8TB24 985 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 C2orf15Q8WU43 125 aaKnown RBP22.67■■□□□ 1.22
TSEN54-205ENST00000578415 RAD54LQ92698 747 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 USP13Q92995 863 aaPredicted RBP22.67■■□□□ 1.22
TSEN54-205ENST00000578415 CALML4Q96GE6 196 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 CCSER1Q9C0I3 900 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 ZHX3Q9H4I2 956 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 DPP3Q9NY33 737 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 ABI2Q9NYB9 513 aaPredicted RBP22.67■■□□□ 1.22
TSEN54-205ENST00000578415 STYXL1Q9Y6J8 313 aa22.67■■□□□ 1.22
TSEN54-205ENST00000578415 MAP1BP46821 2468 aaKnown RBP22.67■■□□□ 1.22
TSEN54-205ENST00000578415 KIF26AQ9ULI4 1882 aaPredicted RBP22.66■■□□□ 1.22
TSEN54-205ENST00000578415 AXIN1O15169 862 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 F11P03951 625 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 NLRP12P59046 1061 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 GRIN1Q05586 938 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 SF3A2Q15428 464 aaKnown RBP22.66■■□□□ 1.22
TSEN54-205ENST00000578415 TAF12Q16514 161 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 ADALQ6DHV7 355 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 EFCAB13Q8IY85 973 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 THEM5Q8N1Q8 247 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 GAB3Q8WWW8 586 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 ARRDC1-AS1Q9H2J1 176 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 IKZF4Q9H2S9 585 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 EBF3Q9H4W6 596 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 TMLHEQ9NVH6 421 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 ZMYM5Q9UJ78 669 aa22.66■■□□□ 1.22
TSEN54-205ENST00000578415 SCN1AP35498 2009 aa22.65■■□□□ 1.22
TSEN54-205ENST00000578415 CCDC163A0A0D9SF12 145 aa22.65■■□□□ 1.22
TSEN54-205ENST00000578415 TRDMT1O14717 391 aaKnown RBP22.65■■□□□ 1.22
TSEN54-205ENST00000578415 RPP40O75818 363 aaKnown RBP22.65■■□□□ 1.22
TSEN54-205ENST00000578415 KRT18P05783 430 aaKnown RBP22.65■■□□□ 1.22
TSEN54-205ENST00000578415 RAP1GAPP47736 663 aa22.65■■□□□ 1.22
TSEN54-205ENST00000578415 RUNX3Q13761 415 aa22.65■■□□□ 1.22
TSEN54-205ENST00000578415 KARSQ15046 597 aaKnown RBP22.65■■□□□ 1.22
TSEN54-205ENST00000578415 CCDC6Q16204 474 aa22.65■■□□□ 1.22
TSEN54-205ENST00000578415 CRELD2Q6UXH1 353 aaPredicted RBP22.65■■□□□ 1.22
TSEN54-205ENST00000578415 KBTBD6Q86V97 674 aa22.65■■□□□ 1.22
TSEN54-205ENST00000578415 MAB21L3Q8N8X9 362 aa22.65■■□□□ 1.22
TSEN54-205ENST00000578415 LOXL4Q96JB6 756 aa22.65■■□□□ 1.22
TSEN54-205ENST00000578415 RXFP3Q9NSD7 469 aa22.65■■□□□ 1.22
TSEN54-205ENST00000578415 AGO2Q9UKV8 859 aaKnown RBP22.65■■□□□ 1.22
TSEN54-205ENST00000578415 ZFHX4Q86UP3 3567 aa22.64■■□□□ 1.22
TSEN54-205ENST00000578415 H3BQV1 296 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 TBCAO75347 108 aaKnown RBP22.64■■□□□ 1.21
TSEN54-205ENST00000578415 GJB2P29033 226 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 ABCD1P33897 745 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 AVPR1AP37288 418 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 GPR15P49685 360 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 LIMK1P53667 647 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 GRSF1Q12849 480 aaKnown RBP eCLIP22.64■■□□□ 1.21
TSEN54-205ENST00000578415 PTPAQ15257 358 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 ST3GAL2Q16842 350 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 AASDHQ4L235 1098 aaPredicted RBP22.64■■□□□ 1.21
TSEN54-205ENST00000578415 TXNDC8Q6A555 127 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 SLFN12LQ6IEE8 588 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 STKLD1Q8NE28 680 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 ST6GALNAC4Q9H4F1 302 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 FBRSL1Q9HCM7 1045 aaKnown RBP22.64■■□□□ 1.21
TSEN54-205ENST00000578415 POLR3BQ9NW08 1133 aaPredicted RBP22.64■■□□□ 1.21
TSEN54-205ENST00000578415 ANK1P16157 1881 aa22.64■■□□□ 1.21
TSEN54-205ENST00000578415 KPNA7A9QM74 516 aa22.63■■□□□ 1.21
TSEN54-205ENST00000578415 TM4SF5O14894 197 aa22.63■■□□□ 1.21
TSEN54-205ENST00000578415 EPN2O95208 641 aa22.63■■□□□ 1.21
TSEN54-205ENST00000578415 EGFP01133 1207 aa22.63■■□□□ 1.21
TSEN54-205ENST00000578415 ZNF806P0C7X5 589 aa22.63■■□□□ 1.21
TSEN54-205ENST00000578415 ARSAP15289 507 aa22.63■■□□□ 1.21
TSEN54-205ENST00000578415 DDX6P26196 483 aaKnown RBP eCLIP22.63■■□□□ 1.21
TSEN54-205ENST00000578415 ADSSP30520 456 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms