RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 A0A1W2PS29 197 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 ALG1L2C9J202 215 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 MYO1FO00160 1098 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 GABRDO14764 452 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 PCDHGA12O60330 932 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 NDUFS2O75306 463 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 JTBO76095 146 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 FGBP02675 491 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 RAP2AP10114 183 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 DDCP20711 480 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 C5AR1P21730 350 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 EDNRBP24530 442 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 IARSP41252 1262 aaKnown RBP3.36□□□□□ -1.87
TOP2A-202ENST00000577541 FXR1P51114 621 aaKnown RBP eCLIP3.36□□□□□ -1.87
TOP2A-202ENST00000577541 PER3P56645 1201 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 NOMO3P69849 1222 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 SLFN5Q08AF3 891 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 TARDBPQ13148 414 aaKnown RBP eCLIP3.36□□□□□ -1.87
TOP2A-202ENST00000577541 MTMR1Q13613 665 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 NOMO2Q5JPE7 1267 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 ZNF529Q6P280 563 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 CEP85Q6P2H3 762 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 TMPRSS12Q86WS5 348 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 DCBLD1Q8N8Z6 715 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 IFI44Q8TCB0 444 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 NRG4Q8WWG1 115 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 TMEM125Q96AQ2 219 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 FAXDC2Q96IV6 333 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 MYOCQ99972 504 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 C7orf25Q9BPX7 421 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 BRINP2Q9C0B6 783 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 SH3BP4Q9P0V3 963 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 PCDHGA9Q9Y5G4 932 aaKnown RBP3.36□□□□□ -1.87
TOP2A-202ENST00000577541 PCDHGA8Q9Y5G5 932 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 PCDHGA7Q9Y5G6 932 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 PCDHGA6Q9Y5G7 932 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 PCDHGA3Q9Y5H0 932 aa3.36□□□□□ -1.87
TOP2A-202ENST00000577541 MYBBP1AQ9BQG0 1328 aaKnown RBP3.36□□□□□ -1.87
TOP2A-202ENST00000577541 SHTN1A0MZ66 631 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 HTRA2O43464 458 aaPredicted RBP3.35□□□□□ -1.87
TOP2A-202ENST00000577541 HAUS5O94927 633 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 CDK11BP21127 795 aaKnown RBP3.35□□□□□ -1.87
TOP2A-202ENST00000577541 CDKN1CP49918 316 aaPredicted RBP3.35□□□□□ -1.87
TOP2A-202ENST00000577541 HNRNPMP52272 730 aaKnown RBP eCLIP3.35□□□□□ -1.87
TOP2A-202ENST00000577541 HTRA4P83105 476 aaPredicted RBP3.35□□□□□ -1.87
TOP2A-202ENST00000577541 RAB39AQ14964 217 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 ATP2B3Q16720 1220 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 GFI1BQ5VTD9 330 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 CATSPERGQ6ZRH7 1159 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 TMPRSS9Q7Z410 1059 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 ADHFE1Q8IWW8 467 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 FITM2Q8N6M3 262 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 IL17RDQ8NFM7 739 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 PIGOQ8TEQ8 1089 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 HDAC10Q969S8 669 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 REPS1Q96D71 796 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 C11orf54Q9H0W9 315 aaPredicted RBP3.35□□□□□ -1.87
TOP2A-202ENST00000577541 SLCO5A1Q9H2Y9 848 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 KLC4Q9NSK0 619 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 CALCOCO1Q9P1Z2 691 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.35□□□□□ -1.87
TOP2A-202ENST00000577541 SAP30BPQ9UHR5 308 aaKnown RBP3.35□□□□□ -1.87
TOP2A-202ENST00000577541 TRHDEQ9UKU6 1024 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 SPEF1Q9Y4P9 236 aa3.35□□□□□ -1.87
TOP2A-202ENST00000577541 PRAMEF33A0A0G2JMD5 474 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 KLHL33A6NCF5 533 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 SMIM22K7EJ46 135 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 NTN3O00634 580 aaPredicted RBP3.34□□□□□ -1.87
TOP2A-202ENST00000577541 PRAMEF10O60809 474 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 DNAJB5O75953 348 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 TGFB3P10600 412 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 SLC6A4P31645 630 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 SLC16A1P53985 500 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 ADKP55263 362 aaKnown RBP3.34□□□□□ -1.87
TOP2A-202ENST00000577541 RPS7P62081 194 aaKnown RBP3.34□□□□□ -1.87
TOP2A-202ENST00000577541 TLE1Q04724 770 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 FPGSQ05932 587 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 PABPC1LQ4VXU2 614 aaKnown RBP3.34□□□□□ -1.87
TOP2A-202ENST00000577541 MIGA2Q7L4E1 593 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 PRPF38AQ8NAV1 312 aaKnown RBP3.34□□□□□ -1.87
TOP2A-202ENST00000577541 CCHCR1Q8TD31 782 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 NSUN6Q8TEA1 469 aaKnown RBP3.34□□□□□ -1.87
TOP2A-202ENST00000577541 STON2Q8WXE9 905 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 COA7Q96BR5 231 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 TEKT5Q96M29 485 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 SLC2A13Q96QE2 648 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 DMRTA2Q96SC8 542 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 LDAHQ9H6V9 325 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 MKS1Q9NXB0 559 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 JKAMPQ9P055 326 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 DNM3Q9UQ16 869 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 NEU2Q9Y3R4 380 aa3.34□□□□□ -1.87
TOP2A-202ENST00000577541 E5RJQ4 531 aa3.33□□□□□ -1.88
TOP2A-202ENST00000577541 ADAMTS3O15072 1205 aa3.33□□□□□ -1.88
TOP2A-202ENST00000577541 SLC43A1O75387 559 aa3.33□□□□□ -1.88
TOP2A-202ENST00000577541 ANXA1P04083 346 aa3.33□□□□□ -1.88
TOP2A-202ENST00000577541 T-ENOLP0DO92 83 aa3.33□□□□□ -1.88
TOP2A-202ENST00000577541 MTHFD1P11586 935 aaKnown RBP3.33□□□□□ -1.88
TOP2A-202ENST00000577541 FCER1AP12319 257 aa3.33□□□□□ -1.88
TOP2A-202ENST00000577541 GUCY2FP51841 1108 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms