RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 SDCBP2Q9H190 292 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 CYLDQ9NQC7 956 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 MIOSQ9NXC5 875 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 PCDH10Q9P2E7 1040 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 UVRAGQ9P2Y5 699 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 STXBP5LQ9Y2K9 1186 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 PCDHGC5Q9Y5F6 944 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 SLC4A7Q9Y6M7 1214 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 PPEF2O14830 753 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 SPTLC1O15269 473 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 THAP12O43422 761 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 TRAPPC3O43617 180 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 ODC1P11926 461 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 CD58P19256 250 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 NSFP46459 744 aaKnown RBP13.23□□□□□ -0.29
TSEN54-204ENST00000577197 CLCNKBP51801 687 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 NDST1P52848 882 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 GALCP54803 685 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 SNX16P57768 344 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 GPC5P78333 572 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 DEFB103AP81534 67 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 ELAVL2Q12926 359 aaKnown RBP13.23□□□□□ -0.29
TSEN54-204ENST00000577197 SCARA3Q6AZY7 606 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 LCLAT1Q6UWP7 414 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 SCARA5Q6ZMJ2 495 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 ADGRF2Q8IZF7 708 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 LRRC43Q8N309 656 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 RNF169Q8NCN4 708 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 STK32AQ8WU08 396 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 KBTBD7Q8WVZ9 684 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 RNPC3Q96LT9 517 aaKnown RBP13.23□□□□□ -0.29
TSEN54-204ENST00000577197 PCDHB18PQ96TA0 734 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 LZTFL1Q9NQ48 299 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 TBC1D13Q9NVG8 400 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 CXXC1Q9P0U4 656 aaPredicted RBP13.23□□□□□ -0.29
TSEN54-204ENST00000577197 STK39Q9UEW8 545 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 STRIP2Q9ULQ0 834 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 L1RE1Q9UN81 338 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.23□□□□□ -0.29
TSEN54-204ENST00000577197 COL4A6Q14031 1691 aa13.23□□□□□ -0.29
TSEN54-204ENST00000577197 RCCD1A6NED2 376 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 O00370 1275 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 CYB561D2O14569 222 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 SYN3O14994 580 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 DGKIO75912 1065 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 FTLP02792 175 aaPredicted RBP13.22□□□□□ -0.29
TSEN54-204ENST00000577197 CYP1A2P05177 515 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 CALB1P05937 261 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 PCSK1P29120 753 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 GNL1P36915 607 aaPredicted RBP13.22□□□□□ -0.29
TSEN54-204ENST00000577197 GNG11P61952 73 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 TAP1Q03518 808 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 SHHQ15465 462 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 C9orf50Q5SZB4 431 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 MON1BQ7L1V2 547 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 SYCE1Q8N0S2 351 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 PDCL2Q8N4E4 241 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 SENP8Q96LD8 212 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 CASD1Q96PB1 797 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 ELOVL4Q9GZR5 314 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 PDCL3Q9H2J4 239 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 SNX25Q9H3E2 840 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 GOLGA2P5Q9HBQ8 144 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 RRAGDQ9NQL2 400 aaPredicted RBP13.22□□□□□ -0.29
TSEN54-204ENST00000577197 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.29
TSEN54-204ENST00000577197 WDR35Q9P2L0 1181 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 GUCA1BQ9UMX6 200 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 TSC2P49815 1807 aa13.22□□□□□ -0.29
TSEN54-204ENST00000577197 FNDC1Q4ZHG4 1894 aaPredicted RBP13.21□□□□□ -0.29
TSEN54-204ENST00000577197 B3GAT3O94766 335 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 UPP2O95045 317 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 GJB5O95377 273 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 POMCP01189 267 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 ATP2A2P16615 1042 aaKnown RBP13.21□□□□□ -0.29
TSEN54-204ENST00000577197 IBSPP21815 317 aaPredicted RBP13.21□□□□□ -0.29
TSEN54-204ENST00000577197 MMP8P22894 467 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 AFF1P51825 1210 aaKnown RBP13.21□□□□□ -0.29
TSEN54-204ENST00000577197 CDH8P55286 799 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 MAPRE1Q15691 268 aaKnown RBP13.21□□□□□ -0.29
TSEN54-204ENST00000577197 PKDCCQ504Y2 493 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 LIN9Q5TKA1 542 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 METTL23Q86XA0 190 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 PALB2Q86YC2 1186 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 HERC6Q8IVU3 1022 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 MCOLN2Q8IZK6 566 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 ZNF689Q96CS4 500 aaPredicted RBP13.21□□□□□ -0.29
TSEN54-204ENST00000577197 FAM193BQ96PV7 902 aaPredicted RBP13.21□□□□□ -0.29
TSEN54-204ENST00000577197 ACBD6Q9BR61 282 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 MRPL45Q9BRJ2 306 aaKnown RBP13.21□□□□□ -0.29
TSEN54-204ENST00000577197 MRPL47Q9HD33 250 aaKnown RBP13.21□□□□□ -0.29
TSEN54-204ENST00000577197 SEPT11Q9NVA2 429 aaKnown RBP13.21□□□□□ -0.29
TSEN54-204ENST00000577197 CDH9Q9ULB4 789 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 PCDHB8Q9UN66 801 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 JRKLQ9Y4A0 524 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 SCINQ9Y6U3 715 aa13.21□□□□□ -0.29
TSEN54-204ENST00000577197 MKI67P46013 3256 aaKnown RBP13.21□□□□□ -0.3
TSEN54-204ENST00000577197 CTAGE9A4FU28 777 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 A8MXQ7 604 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 FGFR1P11362 822 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 CD19P15391 556 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms