RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 IRAK3Q9Y616 596 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 CNTNAP2Q9UHC6 1331 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 WDFY4Q6ZS81 3184 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 MUC6Q6W4X9 2439 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 KMT2EQ8IZD2 1858 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 LRRIQ4A6NIV6 560 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 TEX28O15482 410 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 GAS2O43903 313 aaKnown RBP6.88□□□□□ -1.31
NUP88-212ENST00000576708 RFPL2O75678 378 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 EFEMP2O95967 443 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 SOD2P04179 222 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 EDN1P05305 212 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 URODP06132 367 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 GSTP1P09211 210 aaKnown RBP6.88□□□□□ -1.31
NUP88-212ENST00000576708 GLB1P16278 677 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 RPL17P18621 184 aaKnown RBP6.88□□□□□ -1.31
NUP88-212ENST00000576708 LIG1P18858 919 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 IGFBP6P24592 240 aaPredicted RBP6.88□□□□□ -1.31
NUP88-212ENST00000576708 ST13P50502 369 aaKnown RBP6.88□□□□□ -1.31
NUP88-212ENST00000576708 NRG1Q02297 640 aaPredicted RBP6.88□□□□□ -1.31
NUP88-212ENST00000576708 DSC1Q08554 894 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 TRIM29Q14134 588 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 GIT2Q14161 759 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 TFDP1Q14186 410 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 MXD4Q14582 209 aaPredicted RBP6.88□□□□□ -1.31
NUP88-212ENST00000576708 NOTUMQ6P988 496 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 GPR149Q86SP6 731 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 PDZD3Q86UT5 571 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 CATSPER3Q86XQ3 398 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 PALB2Q86YC2 1186 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 TMEM105Q8N8V8 129 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 CNNM3Q8NE01 707 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 HASPINQ8TF76 798 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 RSAD2Q8WXG1 361 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 WDR89Q96FK6 387 aaPredicted RBP6.88□□□□□ -1.31
NUP88-212ENST00000576708 CCDC43Q96MW1 224 aaKnown RBP6.88□□□□□ -1.31
NUP88-212ENST00000576708 RPS6KC1Q96S38 1066 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 PAAF1Q9BRP4 392 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 EMILIN2Q9BXX0 1053 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 GPR62Q9BZJ7 368 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 KCNH6Q9H252 994 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 SFXN1Q9H9B4 322 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 MAN1C1Q9NR34 630 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 MRPL17Q9NRX2 175 aaKnown RBP6.88□□□□□ -1.31
NUP88-212ENST00000576708 SORCS3Q9UPU3 1222 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 TLR6Q9Y2C9 796 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 ZNF318Q5VUA4 2279 aa6.88□□□□□ -1.31
NUP88-212ENST00000576708 CCDC195A0A1B0GUA6 201 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 H0Y858 1186 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 INPPL1O15357 1258 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 NARSO43776 548 aaKnown RBP6.87□□□□□ -1.31
NUP88-212ENST00000576708 N4BP1O75113 896 aaKnown RBP6.87□□□□□ -1.31
NUP88-212ENST00000576708 AXLP30530 894 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 GLUD2P49448 558 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 POU5F1BQ06416 359 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 NCBP1Q09161 790 aaKnown RBP6.87□□□□□ -1.31
NUP88-212ENST00000576708 EEF1DP3Q658K8 133 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 SLC27A1Q6PCB7 646 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 PRSS55Q6UWB4 352 aaPredicted RBP6.87□□□□□ -1.31
NUP88-212ENST00000576708 PPFIBP1Q86W92 1011 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 UBALD2Q8IYN6 164 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 RNF168Q8IYW5 571 aaPredicted RBP6.87□□□□□ -1.31
NUP88-212ENST00000576708 ZDHHC14Q8IZN3 488 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 TMEM130Q8N3G9 435 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 RSPH1Q8WYR4 309 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 CCDC51Q96ER9 411 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 PKNOX2Q96KN3 472 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 KIFC3Q9BVG8 833 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 COLEC11Q9BWP8 271 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 TRIM6Q9C030 488 aaPredicted RBP6.87□□□□□ -1.31
NUP88-212ENST00000576708 UBN1Q9NPG3 1134 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 SNTG2Q9NY99 539 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 BCCIPQ9P287 314 aaKnown RBP eCLIP6.87□□□□□ -1.31
NUP88-212ENST00000576708 GIT1Q9Y2X7 761 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 PLXNA3P51805 1871 aa6.87□□□□□ -1.31
NUP88-212ENST00000576708 A0A1B0GUA9 196 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 CASTOR2A6NHX0 329 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 PTGESO14684 152 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 PI15O43692 258 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 TADA2AO75478 443 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 OR52Z1P0C646 297 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 XRCC6P12956 609 aaKnown RBP eCLIP6.86□□□□□ -1.31
NUP88-212ENST00000576708 DRD2P14416 443 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 VAMP1P23763 118 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 GBP2P32456 591 aaPredicted RBP6.86□□□□□ -1.31
NUP88-212ENST00000576708 LIG3P49916 1009 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 DSG1Q02413 1049 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 ZNF252P-AS1Q0IIN9 211 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 RTP2Q5QGT7 225 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 EXOSC6Q5RKV6 272 aaKnown RBP6.86□□□□□ -1.31
NUP88-212ENST00000576708 FUT10Q6P4F1 479 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 CCDC149Q6ZUS6 474 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 NOSTRINQ8IVI9 506 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 C4orf32Q8N8J7 132 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 FLCNQ8NFG4 579 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 RIN2Q8WYP3 895 aaPredicted RBP6.86□□□□□ -1.31
NUP88-212ENST00000576708 ATOH1Q92858 354 aaPredicted RBP6.86□□□□□ -1.31
NUP88-212ENST00000576708 ZNF707Q96C28 371 aaPredicted RBP6.86□□□□□ -1.31
NUP88-212ENST00000576708 ACSF2Q96CM8 615 aaPredicted RBP6.86□□□□□ -1.31
NUP88-212ENST00000576708 C8orf76Q96K31 380 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms