RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 C2orf15Q8WU43 125 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 DEPDC1BQ8WUY9 529 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 DNASE1L2Q92874 299 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 IRF7Q92985 503 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 PSMG2Q969U7 264 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 FAM84AQ96KN4 292 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 ZSWIM3Q96MP5 696 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 BLZF1Q9H2G9 400 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 LTB4R2Q9NPC1 389 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 SPATA6Q9NWH7 488 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 HSPBP1Q9NZL4 362 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 PCDHA7Q9UN72 937 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 MRPS17Q9Y2R5 130 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 PCDHB5Q9Y5E4 795 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 GTF3C3Q9Y5Q9 886 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 SNX9Q9Y5X1 595 aa10.39□□□□□ -0.75
NPLOC4-212ENST00000573328 UBE4BO95155 1302 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 PRR23AA6NEV1 266 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 FAM170BA6NMN3 283 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 HEPACAM2A8MVW5 462 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 ZNF263O14978 683 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 NCAM2O15394 837 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 LAMTOR5O43504 91 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 CASP1P29466 404 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 CDC25CP30307 473 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 CYP2J2P51589 502 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 RBP5P82980 135 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 CYP4F8P98187 520 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 DNM1Q05193 864 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 SMARCB1Q12824 385 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 MYO1EQ12965 1108 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 STXBP5Q5T5C0 1151 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 GPR158Q5T848 1215 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 ATL3Q6DD88 541 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 ZC3H14Q6PJT7 736 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 UNC13DQ70J99 1090 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 HS2ST1Q7LGA3 356 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 DNAJB7Q7Z6W7 309 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 CBWD2Q8IUF1 395 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 GPIHBP1Q8IV16 184 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 C1orf210Q8IVY1 113 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 ADGRF2Q8IZF7 708 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 PDCL2Q8N4E4 241 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 RDH13Q8NBN7 331 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 CSGALNACT1Q8TDX6 532 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 GIPC2Q8TF65 315 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 E2F7Q96AV8 911 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 FNBP1Q96RU3 617 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 C7orf25Q9BPX7 421 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 ZNF334Q9HCZ1 680 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 DDX43Q9NXZ2 648 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 HSFX1Q9UBD0 423 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 NDRG2Q9UN36 371 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 L1RE1Q9UN81 338 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 MAGED2Q9UNF1 606 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 CFAP54Q96N23 3096 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 WDR87Q6ZQQ6 2873 aa10.38□□□□□ -0.75
NPLOC4-212ENST00000573328 PROB1E7EW31 1015 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 CLIC2O15247 247 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 PRPF40AO75400 957 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 DLATP10515 647 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 GLULP15104 373 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 ATF6P18850 670 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 TNNI1P19237 187 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 ACAT1P24752 427 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 TARSP26639 723 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 SNRNP35Q16560 246 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 NFE2Q16621 373 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 RESP18Q5W5W9 173 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 GAREM2Q75VX8 874 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 ASCL5Q7RTU5 278 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 LRRTM3Q86VH5 581 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 MFSD6LQ8IWD5 586 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 GRAMD1CQ8IYS0 662 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 TMEM86AQ8N2M4 240 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 BORCS6Q96GS4 357 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 PI4K2AQ9BTU6 479 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 DDX23Q9BUQ8 820 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 LRRC3Q9BY71 257 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 KIAA1586Q9HCI6 787 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 SLC39A2Q9NP94 309 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 AGPAT3Q9NRZ7 376 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 EXOC1Q9NV70 894 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 INTS13Q9NVM9 706 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 DLGAP2Q9P1A6 1054 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 MTF2Q9Y483 593 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 PIAS3Q9Y6X2 628 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 MYO16Q9Y6X6 1858 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 R4GN57 208 aa10.37□□□□□ -0.75
NPLOC4-212ENST00000573328 NCANO14594 1321 aa10.36□□□□□ -0.75
NPLOC4-212ENST00000573328 PTPRJQ12913 1337 aa10.36□□□□□ -0.75
NPLOC4-212ENST00000573328 F5P12259 2224 aa10.36□□□□□ -0.75
NPLOC4-212ENST00000573328 MAN2B1O00754 1011 aa10.36□□□□□ -0.75
NPLOC4-212ENST00000573328 HAPLN1P10915 354 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-212ENST00000573328 PCSK1P29120 753 aa10.36□□□□□ -0.75
NPLOC4-212ENST00000573328 MAGEA9P43362 315 aa10.36□□□□□ -0.75
NPLOC4-212ENST00000573328 LHX1P48742 406 aa10.36□□□□□ -0.75
NPLOC4-212ENST00000573328 KPNA1P52294 538 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-212ENST00000573328 KRT85P78386 507 aa10.36□□□□□ -0.75
NPLOC4-212ENST00000573328 CUL4BQ13620 913 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms