RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 LRRC10BA6NIK2 292 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 BCAT1P54687 386 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 MCL1Q07820 350 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 MAPK7Q13164 816 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 IRF5Q13568 498 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 ZACNQ401N2 412 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 COBLL1Q53SF7 1204 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 CEP128Q6ZU80 1094 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 C12orf56Q8IXR9 622 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 FIBCD1Q8N539 461 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 PCYT2Q99447 389 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 C16orf70Q9BSU1 422 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 EIF2AQ9BY44 585 aaKnown RBP10.67□□□□□ -0.7
SMG6-213ENST00000573166 R3HDMLQ9H3Y0 253 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 CYP4F11Q9HBI6 524 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 MAST2Q6P0Q8 1798 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 FGBP02675 491 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 SULT1E1P49888 294 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 CDH6P55285 790 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 RPL10AP62906 217 aaKnown RBP10.67□□□□□ -0.7
SMG6-213ENST00000573166 ZNF211Q13398 564 aaPredicted RBP10.67□□□□□ -0.7
SMG6-213ENST00000573166 EFHC1Q5JVL4 640 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 CC2D1AQ6P1N0 951 aaPredicted RBP10.67□□□□□ -0.7
SMG6-213ENST00000573166 STKLD1Q8NE28 680 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 KAT5Q92993 513 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 KRT82Q9NSB4 513 aa10.67□□□□□ -0.7
SMG6-213ENST00000573166 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.66□□□□□ -0.7
SMG6-213ENST00000573166 NT5C1B-RDH14C9J2C7 533 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 CYBAP13498 195 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 NCAM1P13591 858 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 TDRD10Q5VZ19 366 aaKnown RBP10.66□□□□□ -0.7
SMG6-213ENST00000573166 WSCD1Q658N2 575 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 ZNF606Q8WXB4 792 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 GDAP1L1Q96MZ0 367 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 PPANQ9NQ55 473 aaKnown RBP10.66□□□□□ -0.7
SMG6-213ENST00000573166 FLRT1Q9NZU1 646 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 RNF14Q9UBS8 474 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 SMIM28A0A1B0GU29 152 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 TLL1O43897 1013 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 TJP3O95049 919 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 MAP3K7CLP57077 242 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 BZW1Q7L1Q6 419 aaKnown RBP10.66□□□□□ -0.7
SMG6-213ENST00000573166 CALR3Q96L12 384 aaKnown RBP10.66□□□□□ -0.7
SMG6-213ENST00000573166 AP1M1Q9BXS5 423 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMG6-213ENST00000573166 TJP2Q9UDY2 1190 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 NCK2O43639 380 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 EFCAB14O75071 495 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 ZBED1O96006 694 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 ATF2P15336 505 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 KLRC2P26717 231 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 CCZ1BP86790 482 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 CCZ1P86791 482 aaPredicted RBP10.66□□□□□ -0.7
SMG6-213ENST00000573166 GRIK3Q13003 919 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 C10orf120Q5SQS8 335 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 ZBTB41Q5SVQ8 909 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 ACAD10Q6JQN1 1059 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 SLC7A14Q8TBB6 771 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 SLC20A1Q8WUM9 679 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 CRYGNQ8WXF5 182 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 DNAJC7Q99615 494 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 SPON2Q9BUD6 331 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 IRX2Q9BZI1 471 aaPredicted RBP10.66□□□□□ -0.7
SMG6-213ENST00000573166 FZD8Q9H461 694 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 GOLGA2P5Q9HBQ8 144 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 TELO2Q9Y4R8 837 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 XPAP23025 273 aaPredicted RBP10.66□□□□□ -0.7
SMG6-213ENST00000573166 MAN1A1P33908 653 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 DEUP1Q05D60 604 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 PPIGQ13427 754 aaKnown RBP eCLIP10.66□□□□□ -0.76e-12■■■□□ 18
SMG6-213ENST00000573166 TUSC3Q13454 348 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 GABPB2Q8TAK5 448 aaPredicted RBP10.66□□□□□ -0.7
SMG6-213ENST00000573166 FBXO32Q969P5 355 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 C18orf25Q96B23 403 aaPredicted RBP10.66□□□□□ -0.7
SMG6-213ENST00000573166 SMYD3Q9H7B4 428 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 MSRAQ9UJ68 235 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 PCDHB5Q9Y5E4 795 aa10.66□□□□□ -0.7
SMG6-213ENST00000573166 TIAM2Q8IVF5 1701 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 STK25O00506 426 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 NDC80O14777 642 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 CLTBP09497 229 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 CTNNB1P35222 781 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 APBB2Q92870 758 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 MFSD14AQ96MC6 490 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 HOMER3Q9NSC5 361 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 LSM7Q9UK45 103 aaKnown RBP10.65□□□□□ -0.7
SMG6-213ENST00000573166 GTF3C4Q9UKN8 822 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 TSPAN16Q9UKR8 245 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 SF3B1O75533 1304 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMG6-213ENST00000573166 FRMD3A2A2Y4 597 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 MYADML2A6NDP7 307 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 EFCAB8A8MWE9 144 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 DNM1LO00429 736 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 ADCY6O43306 1168 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 SRGAP2O75044 1071 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 TMEM253P0C7T8 217 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 SRGAP2BP0DMP2 458 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 ACRP10323 421 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 ATP4AP20648 1035 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 CLCN6P51797 869 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms