RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 CCDC183Q5T5S1 534 aa17.32■□□□□ 0.36
LITAF-210ENST00000571976 LRRTM3Q86VH5 581 aa17.32■□□□□ 0.36
LITAF-210ENST00000571976 OSTM1Q86WC4 334 aa17.32■□□□□ 0.36
LITAF-210ENST00000571976 CCDC150Q8NCX0 1101 aa17.32■□□□□ 0.36
LITAF-210ENST00000571976 FEZF2Q8TBJ5 459 aa17.32■□□□□ 0.36
LITAF-210ENST00000571976 C2orf15Q8WU43 125 aaKnown RBP17.32■□□□□ 0.36
LITAF-210ENST00000571976 NECAB3Q96P71 396 aaPredicted RBP17.32■□□□□ 0.36
LITAF-210ENST00000571976 COL25A1Q9BXS0 654 aaPredicted RBP17.32■□□□□ 0.36
LITAF-210ENST00000571976 SNX25Q9H3E2 840 aa17.32■□□□□ 0.36
LITAF-210ENST00000571976 WDR6Q9NNW5 1121 aaKnown RBP17.32■□□□□ 0.36
LITAF-210ENST00000571976 HSFX1Q9UBD0 423 aa17.32■□□□□ 0.36
LITAF-210ENST00000571976 INSL5Q9Y5Q6 135 aa17.32■□□□□ 0.36
LITAF-210ENST00000571976 C5orf42Q9H799 3197 aa17.32■□□□□ 0.36
LITAF-210ENST00000571976 CCL16O15467 120 aa17.31■□□□□ 0.36
LITAF-210ENST00000571976 VNN2O95498 520 aa17.31■□□□□ 0.36
LITAF-210ENST00000571976 GNL1P36915 607 aaPredicted RBP17.31■□□□□ 0.36
LITAF-210ENST00000571976 MARSP56192 900 aaKnown RBP17.31■□□□□ 0.36
LITAF-210ENST00000571976 NFE2Q16621 373 aaPredicted RBP17.31■□□□□ 0.36
LITAF-210ENST00000571976 INTS6LQ5JSJ4 861 aaKnown RBP17.31■□□□□ 0.36
LITAF-210ENST00000571976 SASS6Q6UVJ0 657 aa17.31■□□□□ 0.36
LITAF-210ENST00000571976 ATAD1Q8NBU5 361 aa17.31■□□□□ 0.36
LITAF-210ENST00000571976 FBXL13Q8NEE6 735 aa17.31■□□□□ 0.36
LITAF-210ENST00000571976 SPPL2BQ8TCT7 592 aa17.31■□□□□ 0.36
LITAF-210ENST00000571976 SLC35C1Q96A29 364 aa17.31■□□□□ 0.36
LITAF-210ENST00000571976 RPGRIP1Q96KN7 1286 aa17.31■□□□□ 0.36
LITAF-210ENST00000571976 MED15Q96RN5 788 aa17.31■□□□□ 0.36
LITAF-210ENST00000571976 CDH9Q9ULB4 789 aa17.31■□□□□ 0.36
LITAF-210ENST00000571976 POLIQ9UNA4 740 aa17.31■□□□□ 0.36
LITAF-210ENST00000571976 C19orf67A6NJJ6 358 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 LOC730098B7Z3J9 87 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 CCDC192P0DO97 292 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 PTMSP20962 102 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 ACAT1P24752 427 aaKnown RBP17.3■□□□□ 0.36
LITAF-210ENST00000571976 LMO2P25791 158 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 TUFMP49411 452 aaKnown RBP17.3■□□□□ 0.36
LITAF-210ENST00000571976 PLD1Q13393 1074 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 TPD52L1Q16890 204 aaPredicted RBP17.3■□□□□ 0.36
LITAF-210ENST00000571976 CBWD6Q4V339 395 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 CBWD3Q5JTY5 395 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 CBWD5Q5RIA9 395 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 GRASPQ7Z6J2 395 aaPredicted RBP17.3■□□□□ 0.36
LITAF-210ENST00000571976 TRIM59Q8IWR1 403 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 GJD3Q8N144 294 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 OR6B3Q8NGW1 331 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 FAXDC2Q96IV6 333 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 MRPL45Q9BRJ2 306 aaKnown RBP17.3■□□□□ 0.36
LITAF-210ENST00000571976 PI4K2AQ9BTU6 479 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 CRISPLD1Q9H336 500 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 RAB20Q9NX57 234 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 GTF3C4Q9UKN8 822 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 USTQ9Y2C2 406 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 SLC27A5Q9Y2P5 690 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 NR2E1Q9Y466 385 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 YIPF1Q9Y548 306 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 PCDHB5Q9Y5E4 795 aa17.3■□□□□ 0.36
LITAF-210ENST00000571976 CLUHO75153 1309 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 A8MXQ7 604 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 PMM2O15305 246 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 PDGFRBP09619 1106 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 SSTR3P32745 418 aaPredicted RBP17.29■□□□□ 0.36
LITAF-210ENST00000571976 ALDH1A3P47895 512 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 CDH8P55286 799 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 NOP14P78316 857 aaKnown RBP17.29■□□□□ 0.36
LITAF-210ENST00000571976 TWF1Q12792 350 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 MAPRE1Q15691 268 aaKnown RBP17.29■□□□□ 0.36
LITAF-210ENST00000571976 WDR44Q5JSH3 913 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 SPOPLQ6IQ16 392 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 FAM171BQ6P995 826 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 ELMOD1Q8N336 334 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 ELMO3Q96BJ8 720 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 PKMYT1Q99640 499 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 SYT15Q9BQS2 421 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 SMYD3Q9H7B4 428 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 TMLHEQ9NVH6 421 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 ABI2Q9NYB9 513 aaPredicted RBP17.29■□□□□ 0.36
LITAF-210ENST00000571976 COQ4Q9Y3A0 265 aa17.29■□□□□ 0.36
LITAF-210ENST00000571976 C2orf16Q68DN1 1984 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 MYBPHLA2RUH7 354 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 HCRTO43612 131 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 N4BP1O75113 896 aaKnown RBP17.28■□□□□ 0.36
LITAF-210ENST00000571976 PTPN2P17706 415 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 ASPAP45381 313 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 FMO5P49326 533 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 EPHB3P54753 998 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 MGAT5BQ3V5L5 792 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 IQCEQ6IPM2 695 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 SCARA5Q6ZMJ2 495 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 OTOP3Q7RTS5 596 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 SEMA4DQ92854 862 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 ACSF2Q96CM8 615 aaPredicted RBP17.28■□□□□ 0.36
LITAF-210ENST00000571976 ZNF512Q96ME7 567 aaPredicted RBP17.28■□□□□ 0.36
LITAF-210ENST00000571976 NIF3L1Q9GZT8 377 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 SDCBP2Q9H190 292 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 CYP3A43Q9HB55 503 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 APOBEC3GQ9HC16 384 aaKnown RBP17.28■□□□□ 0.36
LITAF-210ENST00000571976 ABCB6Q9NP58 842 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.28■□□□□ 0.36
LITAF-210ENST00000571976 ANO10Q9NW15 660 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 TMEM63CQ9P1W3 806 aa17.28■□□□□ 0.36
LITAF-210ENST00000571976 DNMT3BQ9UBC3 853 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms