RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SLC44A3Q8N4M1 653 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 TOP6BLQ8N6T0 577 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 GPR152Q8TDT2 470 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 GIPC2Q8TF65 315 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 SMARCE1Q969G3 411 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 ZNF512Q96ME7 567 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 ZSWIM3Q96MP5 696 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 GSDMAQ96QA5 445 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 PLA2G2FQ9BZM2 168 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 AVENQ9NQS1 362 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 MAN1B1Q9UKM7 699 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 GTF3C4Q9UKN8 822 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 MAFFQ9ULX9 164 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 MRPS23Q9Y3D9 190 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 TRIM49BA6NDI0 452 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 PRR33A8MZF0 331 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 PRPF40AO75400 957 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 PDGFRBP09619 1106 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 TRIM49P0CI25 452 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 TRIM49CP0CI26 452 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 HAPLN1P10915 354 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 MYL4P12829 197 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 ANP32AP39687 249 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 VAMP7P51809 220 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 CDH8P55286 799 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 PPP3CAQ08209 521 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 MYO1EQ12965 1108 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 ADAM9Q13443 819 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 TDGQ13569 410 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 MTMR3Q13615 1198 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 HTR4Q13639 388 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 MGAT5BQ3V5L5 792 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 INTS6LQ5JSJ4 861 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 IER5LQ5T953 404 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 ANKRD40Q6AI12 368 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 SV2AQ7L0J3 742 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 DNAJB7Q7Z6W7 309 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 GPIHBP1Q8IV16 184 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 ELOA2Q8IYF1 753 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 ADSSL1Q8N142 457 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 TMEM86AQ8N2M4 240 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 TMC2Q8TDI7 906 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 MMS19Q96T76 1030 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 SEPT5Q99719 369 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 ACBD6Q9BR61 282 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 PI4K2AQ9BTU6 479 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 SDCBP2Q9H190 292 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 CRTAC1Q9NQ79 661 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.98□□□□□ -0.653e-10■■■■■ 130.4
GTF3C1-213ENST00000571886 ABI2Q9NYB9 513 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 IGSF9Q9P2J2 1179 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 NUMBLQ9Y6R0 609 aa10.98□□□□□ -0.65
GTF3C1-213ENST00000571886 PTPRDP23468 1912 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 DENND4CQ5VZ89 1909 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 BIN1O00499 593 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 PHACTR2O75167 634 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 KIF20AO95235 890 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 WARSP23381 471 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 CYP2F1P24903 491 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 RAP1GAPP47736 663 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 ALDH1A3P47895 512 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 EPHA5P54756 1037 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 PSMC1P62191 440 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 BIRC3Q13489 604 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 TRPC3Q13507 836 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 NCOA4Q13772 614 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 TEAD2Q15562 447 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 WDR72Q3MJ13 1102 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 ZACNQ401N2 412 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 COBLL1Q53SF7 1204 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 STXBP5Q5T5C0 1151 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 TANGO2Q6ICL3 276 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 SPOPLQ6IQ16 392 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 FAM171BQ6P995 826 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 GAREM2Q75VX8 874 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 PDZD4Q76G19 769 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 DPH6Q7L8W6 267 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 BMP8AQ7Z5Y6 402 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 FAM186BQ8IYM0 893 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 DCP1BQ8IZD4 617 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 SHKBP1Q8TBC3 707 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 PBXIP1Q96AQ6 731 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 KXD1Q9BQD3 176 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 DPEP3Q9H4B8 488 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 SMYD3Q9H7B4 428 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 RMND1Q9NWS8 449 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 NXF1Q9UBU9 619 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 DUSP12Q9UNI6 340 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 FRMD4BQ9Y2L6 1034 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 R3HCC1Q9Y3T6 440 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 NCANO14594 1321 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 COL4A3Q01955 1670 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 GREB1Q4ZG55 1949 aa10.97□□□□□ -0.65
GTF3C1-213ENST00000571886 A0A1W2PRU2 124 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 PPP1R3GB7ZBB8 358 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 MAPK13O15264 365 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 KINO60870 393 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 SMC2O95347 1197 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 STAU1O95793 577 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 HLA-DRAP01903 254 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms