RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 DDX6P26196 483 aaKnown RBP eCLIP12.31□□□□□ -0.44
CHMP6-202ENST00000571457 RDXP35241 583 aaKnown RBP12.31□□□□□ -0.44
CHMP6-202ENST00000571457 GALK1P51570 392 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 LMAN2Q12907 356 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 DMC1Q14565 340 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 ANKRD1Q15327 319 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 KYAT1Q16773 422 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 UAP1L1Q3KQV9 507 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 PMS2CLQ68D20 193 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 TAS1R3Q7RTX0 852 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 RPLP0P6Q8NHW5 317 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 TSPAN18Q96SJ8 248 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 SEPT5Q99719 369 aaPredicted RBP12.31□□□□□ -0.44
CHMP6-202ENST00000571457 SMG9Q9H0W8 520 aaKnown RBP12.31□□□□□ -0.44
CHMP6-202ENST00000571457 TDP1Q9NUW8 608 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 KIAA1024Q9UPX6 916 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 MSRB2Q9Y3D2 182 aa12.31□□□□□ -0.44
CHMP6-202ENST00000571457 FREM2Q5SZK8 3169 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 CDX4O14627 284 aaPredicted RBP12.3□□□□□ -0.44
CHMP6-202ENST00000571457 SMTNP53814 917 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 PPP2R3AQ06190 1150 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 SMARCB1Q12824 385 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 SAFBQ15424 915 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHMP6-202ENST00000571457 MGAT5BQ3V5L5 792 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 TRIM68Q6AZZ1 485 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 ZPBP2Q6X784 338 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 CPA6Q8N4T0 437 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 TTC9BQ8N6N2 239 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 DEFB124Q8NES8 71 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 TSTD1Q8NFU3 115 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 C2orf15Q8WU43 125 aaKnown RBP12.3□□□□□ -0.44
CHMP6-202ENST00000571457 IL21Q9HBE4 155 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 POLR3BQ9NW08 1133 aaPredicted RBP12.3□□□□□ -0.44
CHMP6-202ENST00000571457 TBX20Q9UMR3 447 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 DNM3Q9UQ16 869 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 SMG1Q96Q15 3661 aaKnown RBP12.3□□□□□ -0.44
CHMP6-202ENST00000571457 THADAQ6YHU6 1953 aa12.3□□□□□ -0.44
CHMP6-202ENST00000571457 ZNF638Q14966 1978 aaKnown RBP12.29□□□□□ -0.44
CHMP6-202ENST00000571457 TTC26A0AVF1 554 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 OTOL1A6NHN0 477 aaPredicted RBP12.29□□□□□ -0.44
CHMP6-202ENST00000571457 H0Y626 953 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 DTNBO60941 627 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 HIP1RO75146 1068 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 TRIM16O95361 564 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 CXCL8P10145 99 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 GJA4P35212 333 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 MATR3P43243 847 aaKnown RBP eCLIP12.29□□□□□ -0.44
CHMP6-202ENST00000571457 MCL1Q07820 350 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 ZBTB6Q15916 424 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 ECM1Q16610 540 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 SLC39A12Q504Y0 691 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 SEZ6Q53EL9 994 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 DAW1Q8N136 415 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 SPIRE2Q8WWL2 714 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 MRPS31Q92665 395 aaKnown RBP12.29□□□□□ -0.44
CHMP6-202ENST00000571457 USP13Q92995 863 aaPredicted RBP12.29□□□□□ -0.44
CHMP6-202ENST00000571457 CD101Q93033 1021 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 CHFRQ96EP1 664 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 ZBTB45Q96K62 511 aaPredicted RBP12.29□□□□□ -0.44
CHMP6-202ENST00000571457 LPIN3Q9BQK8 851 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 NTPCRQ9BSD7 190 aaKnown RBP12.29□□□□□ -0.44
CHMP6-202ENST00000571457 TIPINQ9BVW5 301 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 NUSAP1Q9BXS6 441 aaKnown RBP12.29□□□□□ -0.44
CHMP6-202ENST00000571457 RAB34Q9BZG1 259 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 FBRSL1Q9HCM7 1045 aaKnown RBP12.29□□□□□ -0.44
CHMP6-202ENST00000571457 DDX19AQ9NUU7 478 aaKnown RBP12.29□□□□□ -0.44
CHMP6-202ENST00000571457 LRWD1Q9UFC0 647 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 EVLQ9UI08 416 aaPredicted RBP12.29□□□□□ -0.44
CHMP6-202ENST00000571457 DSEQ9UL01 958 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 CCL26Q9Y258 94 aa12.29□□□□□ -0.44
CHMP6-202ENST00000571457 PI4KAP42356 2102 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 TAF4O00268 1085 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 SLC16A4O15374 487 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 HYAL3O43820 417 aaPredicted RBP12.28□□□□□ -0.44
CHMP6-202ENST00000571457 ARSAP15289 507 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 ATF6P18850 670 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 DPP6P42658 865 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHMP6-202ENST00000571457 LILRA4P59901 499 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 IRX4P78413 519 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 SPAG1Q07617 926 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 NR1H3Q13133 447 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 PSMD2Q13200 908 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 PDIA5Q14554 519 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 ZNF268Q14587 947 aaPredicted RBP12.28□□□□□ -0.44
CHMP6-202ENST00000571457 KIAA1211LQ6NV74 962 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 MON1AQ86VX9 555 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 METTL23Q86XA0 190 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 THEM5Q8N1Q8 247 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
CHMP6-202ENST00000571457 MAB21L3Q8N8X9 362 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 SPPL2BQ8TCT7 592 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 PIGKQ92643 395 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 ATP2A3Q93084 1043 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 SENP8Q96LD8 212 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 ZCWPW1Q9H0M4 648 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 ECT2Q9H8V3 914 aa12.28□□□□□ -0.44
CHMP6-202ENST00000571457 ASH1LQ9NR48 2969 aaKnown RBP12.27□□□□□ -0.44
CHMP6-202ENST00000571457 APC2O95996 2303 aa12.27□□□□□ -0.44
CHMP6-202ENST00000571457 PATE3B3GLJ2 98 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms