RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 CORO1BQ9BR76 489 aa14.39□□□□□ -0.11
RPAIN-207ENST00000570883 LRFN3Q9BTN0 628 aa14.39□□□□□ -0.11
RPAIN-207ENST00000570883 KCNK12Q9HB15 430 aa14.39□□□□□ -0.11
RPAIN-207ENST00000570883 AVENQ9NQS1 362 aaPredicted RBP14.39□□□□□ -0.11
RPAIN-207ENST00000570883 DDX43Q9NXZ2 648 aaKnown RBP14.39□□□□□ -0.11
RPAIN-207ENST00000570883 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.39□□□□□ -0.11
RPAIN-207ENST00000570883 CDH7Q9ULB5 785 aa14.39□□□□□ -0.11
RPAIN-207ENST00000570883 SORCS3Q9UPU3 1222 aa14.39□□□□□ -0.11
RPAIN-207ENST00000570883 R3HCC1Q9Y3T6 440 aaKnown RBP14.39□□□□□ -0.11
RPAIN-207ENST00000570883 NME7Q9Y5B8 376 aa14.39□□□□□ -0.11
RPAIN-207ENST00000570883 TRIM49BA6NDI0 452 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 ANHXE9PGG2 379 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 CD44P16070 742 aaKnown RBP14.38□□□□□ -0.11
RPAIN-207ENST00000570883 CEBPBP17676 345 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 ATF6P18850 670 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 LMO2P25791 158 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 AP3M2P53677 418 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 EPHA5P54756 1037 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 ADAM9Q13443 819 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 BIRC3Q13489 604 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 MTMR3Q13615 1198 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 ZACNQ401N2 412 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 INTS6LQ5JSJ4 861 aaKnown RBP14.38□□□□□ -0.11
RPAIN-207ENST00000570883 TMEM31Q5JXX7 168 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 TRIM67Q6ZTA4 783 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 TMC8Q8IU68 726 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 ZC3H3Q8IXZ2 948 aaKnown RBP14.38□□□□□ -0.11
RPAIN-207ENST00000570883 FAM186BQ8IYM0 893 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 ACBD6Q9BR61 282 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 LRRC3Q9BY71 257 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 ABI2Q9NYB9 513 aaPredicted RBP14.38□□□□□ -0.11
RPAIN-207ENST00000570883 HSFX1Q9UBD0 423 aa14.38□□□□□ -0.11
RPAIN-207ENST00000570883 MUC6Q6W4X9 2439 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 PATJQ8NI35 1801 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 BIN1O00499 593 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 IKBKBO14920 756 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 PHACTR2O75167 634 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 ATP2C2O75185 946 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 MOSPD3O75425 235 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 WARSP23381 471 aaKnown RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 RPL13P26373 211 aaKnown RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 ATICP31939 592 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 VAMP7P51809 220 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 MCCD1P59942 119 aaPredicted RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 PSMC1P62191 440 aaKnown RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 MYL7Q01449 175 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 TSPY1Q01534 308 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 PPP3CAQ08209 521 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 SIGLEC14Q08ET2 396 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 SMARCB1Q12824 385 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 TRPC3Q13507 836 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 NCOA4Q13772 614 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 MORC3Q14149 939 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 WDR72Q3MJ13 1102 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 ANKRD40Q6AI12 368 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 CLEC17AQ6ZS10 378 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 INTS8Q75QN2 995 aaKnown RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 SV2AQ7L0J3 742 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 DPH6Q7L8W6 267 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 DCP1BQ8IZD4 617 aaKnown RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 SPPL2BQ8TCT7 592 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 C2orf15Q8WU43 125 aaKnown RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 ASIC4Q96FT7 647 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 MMS19Q96T76 1030 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 SEPT5Q99719 369 aaPredicted RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 MRPL45Q9BRJ2 306 aaKnown RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 VRTNQ9H8Y1 702 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 ZNF334Q9HCZ1 680 aaPredicted RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 IGSF9Q9P2J2 1179 aa14.37□□□□□ -0.11
RPAIN-207ENST00000570883 MRPS23Q9Y3D9 190 aaKnown RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 KIF26AQ9ULI4 1882 aaPredicted RBP14.37□□□□□ -0.11
RPAIN-207ENST00000570883 COL4A2P08572 1712 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 MYBPHLA2RUH7 354 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 NARSO43776 548 aaKnown RBP14.36□□□□□ -0.11
RPAIN-207ENST00000570883 HAPLN1P10915 354 aaPredicted RBP14.36□□□□□ -0.11
RPAIN-207ENST00000570883 PCSK1P29120 753 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 PSMC2P35998 433 aaKnown RBP14.36□□□□□ -0.11
RPAIN-207ENST00000570883 ALDH1A3P47895 512 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 LHX1P48742 406 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 EPHB3P54753 998 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 TNNC1P63316 161 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 ENPEPQ07075 957 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 PLD1Q13393 1074 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 ZNF699Q32M78 642 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 MGAT5BQ3V5L5 792 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 IQCEQ6IPM2 695 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 PARM1Q6UWI2 310 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 UBALD2Q8IYN6 164 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 ELMOD1Q8N336 334 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 FGF14Q92915 247 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 ZNF512Q96ME7 567 aaPredicted RBP14.36□□□□□ -0.11
RPAIN-207ENST00000570883 LPIN3Q9BQK8 851 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 SYT15Q9BQS2 421 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 MKNK1Q9BUB5 465 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 RPP25Q9BUL9 199 aaKnown RBP14.36□□□□□ -0.11
RPAIN-207ENST00000570883 GTPBP4Q9BZE4 634 aaKnown RBP14.36□□□□□ -0.11
RPAIN-207ENST00000570883 SMYD3Q9H7B4 428 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 CRTAC1Q9NQ79 661 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 ASAH2Q9NR71 780 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms